Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
CUX2O14529 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 AC011498.5-201ENST00000592027 486 ntBASIC33.61■■■□□ 2.97
CUX2O14529 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC33.61■■■□□ 2.97
CUX2O14529 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC33.61■■■□□ 2.97
CUX2O14529 GALC-202ENST00000393568 2054 ntTSL 2 BASIC33.61■■■□□ 2.97
CUX2O14529 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC33.6■■■□□ 2.97
CUX2O14529 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC33.6■■■□□ 2.97
CUX2O14529 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC33.6■■■□□ 2.97
CUX2O14529 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
CUX2O14529 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC33.6■■■□□ 2.97
CUX2O14529 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC33.6■■■□□ 2.97
CUX2O14529 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC33.6■■■□□ 2.97
CUX2O14529 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC33.6■■■□□ 2.97
CUX2O14529 MIR2861-201ENST00000636310 90 ntBASIC33.6■■■□□ 2.97
CUX2O14529 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC33.6■■■□□ 2.97
CUX2O14529 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC33.6■■■□□ 2.97
CUX2O14529 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC33.6■■■□□ 2.97
CUX2O14529 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CUX2O14529 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CUX2O14529 AC005104.2-201ENST00000427818 678 ntBASIC33.59■■■□□ 2.97
CUX2O14529 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC33.59■■■□□ 2.97
CUX2O14529 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC33.59■■■□□ 2.97
CUX2O14529 KRT16P4-201ENST00000453883 522 ntBASIC33.59■■■□□ 2.97
CUX2O14529 MPI-205ENST00000562606 1052 ntTSL 3 BASIC33.59■■■□□ 2.97
CUX2O14529 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CUX2O14529 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC33.59■■■□□ 2.97
CUX2O14529 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
CUX2O14529 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CUX2O14529 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC33.58■■■□□ 2.97
CUX2O14529 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC33.58■■■□□ 2.97
CUX2O14529 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC33.58■■■□□ 2.97
CUX2O14529 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC33.58■■■□□ 2.97
CUX2O14529 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CUX2O14529 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
CUX2O14529 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC33.57■■■□□ 2.97
CUX2O14529 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
CUX2O14529 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
CUX2O14529 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC33.57■■■□□ 2.97
CUX2O14529 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC33.57■■■□□ 2.97
CUX2O14529 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
CUX2O14529 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC33.57■■■□□ 2.97
CUX2O14529 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC33.57■■■□□ 2.97
CUX2O14529 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC33.57■■■□□ 2.97
CUX2O14529 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC33.57■■■□□ 2.97
CUX2O14529 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC33.57■■■□□ 2.96
CUX2O14529 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.96
CUX2O14529 GUSBP5-202ENST00000510805 1989 ntBASIC33.57■■■□□ 2.96
CUX2O14529 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
CUX2O14529 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
CUX2O14529 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC33.57■■■□□ 2.96
CUX2O14529 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC33.56■■■□□ 2.96
CUX2O14529 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
CUX2O14529 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC33.56■■■□□ 2.96
CUX2O14529 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC33.56■■■□□ 2.96
CUX2O14529 DYM-203ENST00000442713 2147 ntTSL 2 BASIC33.56■■■□□ 2.96
CUX2O14529 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CUX2O14529 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CUX2O14529 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC33.56■■■□□ 2.96
CUX2O14529 CHCHD2P8-201ENST00000429873 447 ntBASIC33.56■■■□□ 2.96
CUX2O14529 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC33.56■■■□□ 2.96
CUX2O14529 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC33.56■■■□□ 2.96
CUX2O14529 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC33.56■■■□□ 2.96
CUX2O14529 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
CUX2O14529 TPSP2-201ENST00000561760 610 ntBASIC33.56■■■□□ 2.96
CUX2O14529 LINC01711-201ENST00000598340 967 ntBASIC33.56■■■□□ 2.96
CUX2O14529 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
CUX2O14529 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CUX2O14529 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC33.55■■■□□ 2.96
CUX2O14529 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC33.55■■■□□ 2.96
CUX2O14529 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
CUX2O14529 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CUX2O14529 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
CUX2O14529 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC33.55■■■□□ 2.96
CUX2O14529 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
CUX2O14529 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC33.55■■■□□ 2.96
CUX2O14529 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC33.55■■■□□ 2.96
CUX2O14529 AL691403.2-201ENST00000618460 490 ntBASIC33.55■■■□□ 2.96
CUX2O14529 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
CUX2O14529 PHB2-202ENST00000440277 996 ntTSL 5 BASIC33.54■■■□□ 2.96
CUX2O14529 RASA4DP-201ENST00000460726 1199 ntBASIC33.54■■■□□ 2.96
CUX2O14529 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC33.54■■■□□ 2.96
CUX2O14529 AC012615.1-201ENST00000565797 1299 ntBASIC33.54■■■□□ 2.96
CUX2O14529 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
CUX2O14529 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC33.53■■■□□ 2.96
CUX2O14529 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
CUX2O14529 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CUX2O14529 MIR564-202ENST00000385049 94 ntBASIC33.53■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms