Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CCDC196A0A1B0GTZ2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.75■■□□□ 1.23
CCDC196A0A1B0GTZ2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 KRT18P29-201ENST00000397031 1267 ntBASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.74■■□□□ 1.23
CCDC196A0A1B0GTZ2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 KRASP1-201ENST00000407852 552 ntBASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC124016.1-201ENST00000609552 612 ntBASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.73■■□□□ 1.23
CCDC196A0A1B0GTZ2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CCDC196A0A1B0GTZ2 AC110285.5-201ENST00000611501 352 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms