Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 AC007322.4-201ENST00000509611 723 ntBASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 KRT18P14-201ENST00000534205 1250 ntBASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 AC105020.6-201ENST00000621523 1217 ntBASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRBV27A0A0K0K1C4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 AC023632.3-201ENST00000521633 145 ntBASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 AC010536.3-201ENST00000620306 533 ntBASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 AC009113.1-201ENST00000570267 2443 ntBASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRBV27A0A0K0K1C4 AC007613.1-201ENST00000572811 2597 ntBASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AC135050.7-201ENST00000624508 2218 ntBASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AL139246.5-201ENST00000606645 996 ntBASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AC016405.3-201ENST00000607710 860 ntBASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV27A0A0K0K1C4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms