Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 TUBB8P6-201ENST00000436895 1288 ntBASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 GCSHP5-201ENST00000443090 522 ntBASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 AC098590.1-201ENST00000468126 897 ntBASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
TRAV41A0A0B4J266 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 KRT16P5-201ENST00000455284 522 ntBASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TRAV41A0A0B4J266 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 KRT18P16-201ENST00000510337 1294 ntBASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV41A0A0B4J266 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV41A0A0B4J266 UBE2SP1-201ENST00000450587 669 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms