Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 EEF1DP3-203ENST00000566025 782 ntBASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV9-1A0A075B6T8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SYT6-210ENST00000641643 1587 ntBASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRAV9-1A0A075B6T8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AC008764.6-201ENST00000595909 2069 ntBASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AL512353.2-201ENST00000448759 1962 ntBASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AL162741.1-201ENST00000565563 1558 ntBASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 POU5F1P4-201ENST00000413175 1085 ntBASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 AC092171.4-201ENST00000609130 632 ntBASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV9-1A0A075B6T8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms