Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MIR6748-201ENST00000610433 71 ntBASIC5.43□□□□□ -1.54
YIPF1Q9Y548 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.43□□□□□ -1.54
YIPF1Q9Y548 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
YIPF1Q9Y548 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
YIPF1Q9Y548 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
YIPF1Q9Y548 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
YIPF1Q9Y548 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC004158.1-201ENST00000564508 4319 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 RN7SKP216-201ENST00000411050 312 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 COX6B1P1-201ENST00000415962 213 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 EIF2S2P3-201ENST00000428356 999 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC099670.2-201ENST00000435130 321 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 REG1CP-206ENST00000447469 496 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 RPL31P44-201ENST00000447680 377 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC105233.1-201ENST00000498840 781 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 OR7E128P-201ENST00000532736 1024 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC090079.2-201ENST00000575289 768 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 MIR6820-201ENST00000611508 62 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 MIR6133-201ENST00000617057 108 ntBASIC5.42□□□□□ -1.54
YIPF1Q9Y548 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.42□□□□□ -1.54
YIPF1Q9Y548 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL355488.2-201ENST00000609909 2850 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC007996.1-201ENST00000620414 2821 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 RN7SKP115-201ENST00000363177 317 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 RNU6-697P-201ENST00000363348 107 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 RNA5SP428-201ENST00000365129 132 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL035419.1-201ENST00000397037 564 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 CHEK2P3-201ENST00000416118 248 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL049745.1-201ENST00000433953 286 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC073648.4-201ENST00000442655 781 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC020779.1-201ENST00000478757 796 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 RN7SL814P-201ENST00000487715 300 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 COX6B1P5-201ENST00000509843 249 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 OR7E10P-201ENST00000526420 991 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC027281.1-201ENST00000574178 758 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC011487.3-201ENST00000593607 453 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.41□□□□□ -1.54
YIPF1Q9Y548 MEMO1P5-201ENST00000604810 406 ntBASIC5.41□□□□□ -1.54
YIPF1Q9Y548 AP005432.2-201ENST00000608162 586 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms