Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC009238.2-201ENST00000431026 355 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 OR52B5P-201ENST00000435337 951 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC090686.1-201ENST00000481577 749 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC004825.1-201ENST00000555068 586 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AP005131.7-201ENST00000610087 611 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 AC118658.2-201ENST00000618697 459 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 OR52B5P-202ENST00000641118 1110 ntBASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAPPC4Q9Y296 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 MAPK10-349ENST00000641767 3661 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 MTCO1P11-201ENST00000429111 1528 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 MIR600-201ENST00000385007 98 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 MIR1182-201ENST00000408363 97 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AP000534.2-201ENST00000412729 568 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 COPS8P2-201ENST00000473228 627 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 RN7SL30P-201ENST00000488416 306 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC073073.1-201ENST00000493920 463 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 HNRNPRP2-201ENST00000528421 743 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC024940.3-201ENST00000538551 316 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 SUMO2P15-201ENST00000604285 278 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 TAS2R6P-201ENST00000605022 826 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AL353600.1-201ENST00000608148 251 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 OR7M1P-201ENST00000608946 533 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC004808.2-201ENST00000627965 773 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 SOCS5P3-201ENST00000425115 1576 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 ZNF733P-202ENST00000444809 1573 ntBASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.69□□□□□ -1.66
TRAPPC4Q9Y296 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC011503.2-201ENST00000594230 1500 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 MTHFD2P5-201ENST00000320415 844 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 SNORA17.1-201ENST00000362945 126 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 MIR223-201ENST00000385204 110 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AL358176.3-201ENST00000420757 454 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 NPM1P22-201ENST00000427761 952 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 RPS26P4-201ENST00000431743 355 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 RN7SL172P-201ENST00000460535 303 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 RPS4XP1-201ENST00000482189 787 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC134349.2-201ENST00000535136 910 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 RN7SL52P-201ENST00000584271 284 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC015849.6-201ENST00000605454 474 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AC097505.1-201ENST00000610199 565 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 AL122125.1-201ENST00000616999 600 ntBASIC4.68□□□□□ -1.66
TRAPPC4Q9Y296 MIR6729-201ENST00000618194 65 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms