Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 PSAT1P4-201ENST00000466500 526 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 RPL23P10-201ENST00000468780 412 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 RPS4XP17-201ENST00000479057 754 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC010350.1-201ENST00000504908 231 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 PSMA2P1-201ENST00000526365 646 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 GLYATL1P4-201ENST00000529326 906 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC115286.1-201ENST00000604298 434 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AC004890.3-201ENST00000605566 1095 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AL022345.1-201ENST00000607292 135 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 U2.1-201ENST00000618978 145 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 FKBP1AP4-201ENST00000631775 336 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 U6.107-201ENST00000637108 79 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TRIM35Q9UPQ4 ZNF807-201ENST00000328088 1707 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC018688.1-201ENST00000636528 1754 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RN7SKP6-201ENST00000364795 319 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 Y_RNA.447-201ENST00000384184 113 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RNU6-809P-201ENST00000384461 107 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 Y_RNA.527-201ENST00000384573 102 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RPL26P37-201ENST00000411983 438 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 EEF1GP7-201ENST00000422983 703 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RPS7P14-201ENST00000426405 583 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RPS3AP52-201ENST00000435639 297 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RPL14P5-201ENST00000436474 730 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC104332.1-201ENST00000440471 797 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL161626.1-201ENST00000441480 490 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 HMGB3P22-202ENST00000451823 572 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC040975.1-201ENST00000472104 316 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC099521.1-201ENST00000482557 334 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 MTCO1P29-201ENST00000496868 288 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 IGLVI-42-201ENST00000522485 381 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL121594.2-201ENST00000541658 472 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 MTCO3P23-201ENST00000561363 289 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 MIR548AI-201ENST00000579940 88 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC061975.3-201ENST00000583209 244 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC110743.1-201ENST00000584870 478 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC005070.2-201ENST00000604391 260 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 APOOP1-201ENST00000604695 592 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 ATP1B3P1-201ENST00000605365 821 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL136985.2-201ENST00000607372 535 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL162373.1-201ENST00000620433 407 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC091903.1-201ENST00000624322 454 ntBASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
TRIM35Q9UPQ4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
TRIM35Q9UPQ4 AL035555.1-201ENST00000404462 1790 ntBASIC9.52□□□□□ -0.88
TRIM35Q9UPQ4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms