Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC022360.1-201ENST00000521058 340 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AP006245.2-201ENST00000522004 300 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC006272.2-201ENST00000594725 163 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AP002884.5-201ENST00000595053 1132 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC011626.1-201ENST00000604710 562 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC093799.2-201ENST00000610062 578 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AP003072.5-201ENST00000623872 773 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 AC073429.2-201ENST00000569694 1444 ntBASIC6.08□□□□□ -1.44
CLIP2Q9UDT6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 CHMP1B2P-201ENST00000399581 597 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 GJA6P-201ENST00000415117 1042 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AL645937.3-201ENST00000453647 936 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 DNAJB5P1-201ENST00000454004 806 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 RN7SL189P-201ENST00000468631 289 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 USP9YP2-201ENST00000504503 1000 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 USP9YP1-201ENST00000513521 1002 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 MIR4436B2-201ENST00000581415 91 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 MIR4436B1-201ENST00000583272 91 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AC020763.5-201ENST00000623298 430 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 SAMMSON-213ENST00000641336 1521 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AL450345.1-202ENST00000605741 3881 ntBASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLIP2Q9UDT6 AC004817.4-201ENST00000602396 3625 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 CDC27P2-201ENST00000425026 1922 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 OR9G4-201ENST00000302957 984 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RNA5SP123-201ENST00000363244 119 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RN7SKP153-201ENST00000365026 316 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RNA5SP455-201ENST00000365190 119 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 MIR589-201ENST00000385238 99 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RPS26P13-201ENST00000419030 330 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AL161722.2-201ENST00000434731 981 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 PA2G4P6-201ENST00000438325 1197 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 snoU13.20-201ENST00000459180 104 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 HMGN2P25-201ENST00000486956 268 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AC100784.1-201ENST00000522790 310 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AL451049.1-201ENST00000608672 497 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AP005131.7-201ENST00000610087 611 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 TCP1P3-201ENST00000414406 1498 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AC112255.1-201ENST00000624070 2493 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 AC023421.1-201ENST00000590535 1785 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP2Q9UDT6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms