Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AP000534.2-201ENST00000412729 568 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC013410.1-201ENST00000436223 1232 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 RN7SL517P-201ENST00000462240 305 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 COX6B1P5-201ENST00000509843 249 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 ENPP7P9-201ENST00000514456 627 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC027308.1-201ENST00000517993 110 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC005868.1-201ENST00000536421 331 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 MIR3176-201ENST00000582210 90 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC104687.2-201ENST00000604442 342 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC087783.2-201ENST00000605070 562 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 ECM1P2-201ENST00000503354 1577 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AC007996.1-201ENST00000620414 2821 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 AL022393.1-201ENST00000625142 1677 ntBASIC4.77□□□□□ -1.65
VPS29Q9UBQ0 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AL050305.1-201ENST00000399993 1230 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AL136116.2-201ENST00000404020 785 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 U3.36-201ENST00000408418 213 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC117394.1-201ENST00000477323 567 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 HNRNPRP2-201ENST00000528421 743 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 OR7E128P-201ENST00000532736 1024 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AL122125.1-201ENST00000616999 600 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC004808.2-201ENST00000627965 773 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 THAP12P4-201ENST00000528321 2266 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VPS29Q9UBQ0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 TET1P1-201ENST00000426627 2301 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 SNURFL-201ENST00000309296 343 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 Z97832.1-201ENST00000402490 328 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AC002524.1-201ENST00000411687 547 ntBASIC4.75□□□□□ -1.65
VPS29Q9UBQ0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms