Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 GAPDHP14-201ENST00000450472 937 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 SBDSP1-204ENST00000453858 737 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RNU1-88P-201ENST00000459274 128 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RN7SL273P-201ENST00000481561 299 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 HMGB1P38-201ENST00000490557 577 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 RPS23P1-201ENST00000491662 432 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC021106.1-201ENST00000509020 1058 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC105313.1-201ENST00000509121 353 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 CYCSP22-201ENST00000517555 339 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC023825.1-201ENST00000566704 1030 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL163952.1-202ENST00000569625 600 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC005224.3-201ENST00000584683 2140 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC079880.2-201ENST00000603790 1213 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL450336.1-201ENST00000605180 586 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AP002802.2-201ENST00000605877 235 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC067838.1-201ENST00000606064 577 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 OR7A19P-201ENST00000608051 733 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL512624.1-201ENST00000613638 469 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AC079395.3-201ENST00000615161 484 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AL355493.4-201ENST00000618530 292 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 MIR193BHG-214ENST00000641765 509 ntBASIC5.85□□□□□ -1.47
DKK3Q9UBP4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
DKK3Q9UBP4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC117409.1-201ENST00000470499 1310 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 RNU6-468P-201ENST00000384003 109 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 VN1R31P-201ENST00000417498 730 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC127526.2-201ENST00000426436 775 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 BX119321.1-201ENST00000428912 797 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AL161636.2-201ENST00000445179 927 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AL591623.2-201ENST00000449978 222 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 RPS27AP2-201ENST00000457576 465 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC022215.1-201ENST00000481770 362 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC074255.1-201ENST00000511259 501 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 TOMM22P4-201ENST00000511318 336 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 TMEM97P2-201ENST00000517841 403 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AP001207.2-201ENST00000519490 539 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 UBTFL10-201ENST00000528532 562 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC008147.3-201ENST00000548666 354 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 SETP1-201ENST00000556014 845 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC025918.2-201ENST00000558683 763 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC007225.2-201ENST00000562529 256 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC015802.2-201ENST00000589690 189 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AL159169.2-201ENST00000610061 1269 ntBASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.84□□□□□ -1.47
DKK3Q9UBP4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 697.6 ms