Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC083843.3-201ENST00000623679 2186 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC009804.1-201ENST00000400949 179 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC233289.1-201ENST00000403700 508 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 SLC35E1P1-201ENST00000419313 864 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 CKS1BP6-201ENST00000424932 240 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL161636.2-201ENST00000445179 927 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 RPL31P15-201ENST00000449770 338 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 RHEBP2-201ENST00000450289 600 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC109309.2-201ENST00000612597 332 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AC073575.2-201ENST00000614212 627 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 MIR1910-201ENST00000636955 80 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 MTND5P23-201ENST00000430812 1655 ntBASIC4.73□□□□□ -1.65
VAPAQ9P0L0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAPAQ9P0L0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC009643.2-201ENST00000603543 1448 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AL672167.1-205ENST00000641112 3080 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RNA5SP183-201ENST00000362452 119 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 SNORA73.1-201ENST00000363107 205 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 ATP5HP3-201ENST00000396994 486 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC239798.3-201ENST00000454459 408 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC114982.2-201ENST00000461396 358 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RN7SL515P-201ENST00000463999 297 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RN7SL184P-201ENST00000488308 297 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC020890.1-201ENST00000491837 504 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RN7SKP70-201ENST00000516655 271 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RNU6-943P-201ENST00000516960 98 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC024940.3-201ENST00000538551 316 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AP002373.2-201ENST00000541631 1060 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC008126.1-201ENST00000549019 480 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC104687.2-201ENST00000604442 342 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 AC136428.4-201ENST00000634254 1155 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 RBPJP2-201ENST00000618187 1444 ntBASIC4.72□□□□□ -1.65
VAPAQ9P0L0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAPAQ9P0L0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms