Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 BNIP3P1-201ENST00000547295 580 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 AC010245.2-201ENST00000606908 1167 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM4Q9C037 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 MTCO1P15-201ENST00000529569 1526 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM4Q9C037 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
TRIM4Q9C037 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 SCN1A-220ENST00000641603 12506 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC022417.1-201ENST00000624768 1303 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC112255.1-201ENST00000624070 2493 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 RNU1-106P-201ENST00000384382 164 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 RPL10P10-201ENST00000403509 664 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC233289.1-201ENST00000403700 508 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 NDUFB4P8-201ENST00000435351 367 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 NANOGP9-201ENST00000439890 892 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 MEMO1P4-201ENST00000453590 386 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC022795.1-201ENST00000473808 480 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 RN7SL817P-201ENST00000480777 288 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 PGAM1P13-201ENST00000507497 754 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC110775.1-201ENST00000513721 462 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 RNA5SP360-201ENST00000516555 118 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AP001922.4-201ENST00000526967 290 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC122688.1-201ENST00000541494 223 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 OR11J2P-201ENST00000555298 907 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC015720.2-201ENST00000567709 334 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL353600.1-201ENST00000608148 251 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 AC091953.3-201ENST00000623220 236 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL596275.2-204ENST00000641628 552 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL596275.2-206ENST00000641957 626 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 AL356317.1-201ENST00000396110 1436 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
TRIM4Q9C037 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM4Q9C037 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
TRIM4Q9C037 MTCO1P22-201ENST00000604619 1360 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 OR51H2P-202ENST00000641424 3046 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 RN7SL738P-201ENST00000470264 297 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 RPS3AP15-201ENST00000483874 781 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 NIP7P2-201ENST00000485801 544 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 EIF1P7-201ENST00000487533 337 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC016559.2-201ENST00000510759 359 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 RNA5SP464-201ENST00000516251 108 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 MTCYBP13-201ENST00000578634 1093 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 SS18L2P2-201ENST00000583960 235 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC087283.1-201ENST00000604029 1074 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 FAM25E-202ENST00000608562 189 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC245389.2-201ENST00000616023 576 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 AC242843.1-201ENST00000618702 573 ntBASIC5.29□□□□□ -1.56
TRIM4Q9C037 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
TRIM4Q9C037 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM4Q9C037 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms