Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RMST_5.1-201ENST00000618704 126 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC120057.5-201ENST00000623840 154 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AP005264.7-201ENST00000625003 745 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 RACGAP1P-201ENST00000550663 1879 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 SAMM50P1-201ENST00000455403 1399 ntBASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SSBP3Q9BWW4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 MAPK10-357ENST00000641831 2858 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 UGT2B24P-201ENST00000514441 1597 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC008033.1-201ENST00000216407 1162 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RNU4-12P-201ENST00000365233 139 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 SNORA64.3-201ENST00000365647 134 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC112492.2-201ENST00000432774 1030 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC008072.1-201ENST00000434254 824 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RAB9AP5-201ENST00000437794 597 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 TCEA1P3-201ENST00000443005 880 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RAB9AP2-201ENST00000443911 597 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 NANOGNBP1-201ENST00000448444 480 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RN7SL836P-201ENST00000476140 296 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC091959.2-201ENST00000477363 321 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC008628.2-201ENST00000502605 298 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 HSPE1P23-201ENST00000509838 286 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC109445.1-201ENST00000512356 383 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC008837.2-201ENST00000513076 418 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 OR52H2P-201ENST00000514607 902 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RN7SKP298-201ENST00000515950 94 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 OR8L1P-201ENST00000534005 955 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 RAB11AP2-201ENST00000545905 639 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 FXNP1-201ENST00000555153 337 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC011921.2-201ENST00000589465 152 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CR381653.2-201ENST00000624041 768 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 TATDN2P3-201ENST00000452855 3665 ntBASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSBP3Q9BWW4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms