Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 LDHAL6CP-202ENST00000550738 3224 ntBASIC5□□□□□ -1.61
CCDC28BQ9BUN5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC28BQ9BUN5 SSXP3-201ENST00000442971 1300 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP46-201ENST00000362370 120 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP433-201ENST00000364491 114 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP90-201ENST00000364801 99 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AL050305.1-201ENST00000399993 1230 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 LAP3P1-201ENST00000403648 294 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 CDY8P-201ENST00000428380 1279 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 GAPDHP34-201ENST00000432112 823 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC013410.1-201ENST00000436223 1232 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC004980.3-201ENST00000447046 365 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 CDY20P-201ENST00000447528 1279 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC073476.1-201ENST00000452854 407 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC005008.1-201ENST00000456151 612 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC091180.1-201ENST00000462104 372 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC109481.1-201ENST00000509173 282 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 ENPP7P9-201ENST00000514456 627 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP373-201ENST00000517271 95 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC116553.2-201ENST00000564203 463 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 ARGFXP2-201ENST00000579304 949 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AL713998.2-201ENST00000604538 1198 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AL359091.2-201ENST00000609303 556 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AP005131.7-201ENST00000610087 611 ntBASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC28BQ9BUN5 AL592182.3-201ENST00000642132 3304 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 MIR105-1-201ENST00000385222 81 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC009237.10-201ENST00000414112 510 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 OR2X1P-201ENST00000421144 687 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC110602.1-201ENST00000437414 318 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 RPS11P7-201ENST00000442125 465 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC093166.2-201ENST00000455969 1017 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 OR9N1P-201ENST00000491296 333 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AGGF1P3-201ENST00000493675 1213 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC138866.2-201ENST00000508650 584 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL512310.9-201ENST00000553311 948 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 BLZF2P-201ENST00000553776 1130 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AP000919.1-201ENST00000582850 985 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 BNIP3P7-201ENST00000605641 516 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC000068.2-201ENST00000608816 460 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC006840.1-201ENST00000623069 542 ntBASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC28BQ9BUN5 AC092747.4-201ENST00000620519 1861 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms