Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC013444.1-201ENST00000428909 1904 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 RPL23AP57-201ENST00000332361 466 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RNA5SP483-201ENST00000363431 118 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 Y_RNA.257-201ENST00000364596 102 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 RNU6-1026P-201ENST00000384465 108 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AL096800.1-201ENST00000405326 893 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AL034372.1-201ENST00000407586 754 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC006457.1-201ENST00000420733 392 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC008155.1-201ENST00000421078 329 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 YBX1P8-201ENST00000421881 943 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC006548.1-201ENST00000427470 102 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC004980.3-201ENST00000447046 365 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RPS29P16-201ENST00000452798 171 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 TXNP3-201ENST00000454560 301 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RPL30P15-201ENST00000457129 321 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RPL23AP12-201ENST00000467573 473 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC010301.1-201ENST00000473936 355 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RPL3P10-201ENST00000476002 1164 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC034222.1-201ENST00000494052 532 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RNU6-976P-201ENST00000516086 111 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 RNU4ATAC8P-201ENST00000516196 109 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 SCARNA24.1-201ENST00000516465 137 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 HMGB1P19-201ENST00000517578 577 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 SUMO2P20-201ENST00000520803 283 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AF279873.1-201ENST00000523393 313 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AP001029.3-201ENST00000588063 596 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AL391813.2-201ENST00000609113 322 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 FAM74A6-203ENST00000615956 481 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 CR381572.1-201ENST00000625098 102 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 MIR193BHG-210ENST00000641327 515 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC011493.1-201ENST00000596753 1632 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 MTND5P19-201ENST00000424872 1794 ntBASIC7.25□□□□□ -1.25
USB1Q9BQ65 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
USB1Q9BQ65 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.25□□□□□ -1.25
USB1Q9BQ65 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 AL008638.3-201ENST00000623027 5182 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 AC092125.1-201ENST00000562568 1995 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 AC105046.1-201ENST00000566457 4997 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 EEF1A1P13-201ENST00000503537 1389 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USB1Q9BQ65 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 RNU4-66P-201ENST00000365199 138 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 SET-203ENST00000372688 801 ntTSL 2 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 Y_RNA.414-201ENST00000384011 101 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 RNU6-1032P-201ENST00000384100 107 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.24□□□□□ -1.25
USB1Q9BQ65 MIR548I3-201ENST00000408378 149 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 MIR548I1-201ENST00000408810 149 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 RPL21P107-201ENST00000411449 460 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 AC019181.1-201ENST00000417151 310 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 RPL31P12-201ENST00000422587 358 ntBASIC7.24□□□□□ -1.25
USB1Q9BQ65 AC096644.2-201ENST00000429278 159 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms