Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC009480.2-201ENST00000422916 432 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC046176.1-201ENST00000435260 1170 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 RPL7P11-201ENST00000437586 658 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC016772.1-201ENST00000444170 1261 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 snoU13.20-201ENST00000459180 104 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC021660.1-201ENST00000465006 554 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 RN7SL604P-201ENST00000492589 296 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC100784.1-201ENST00000522790 310 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC021006.3-201ENST00000530771 192 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC083837.1-201ENST00000565297 2994 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 AC011840.5-201ENST00000582125 771 ntBASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHROOM3Q8TF72 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 RNA5SP345-201ENST00000410646 108 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 RPL17P36-201ENST00000420302 549 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 SCAND3P1-201ENST00000439854 1060 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC112498.1-201ENST00000444401 332 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 NDUFA12P1-201ENST00000455914 406 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC090114.3-201ENST00000479267 829 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 EIF1P7-201ENST00000487533 337 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC013701.1-201ENST00000522657 465 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC004158.1-201ENST00000564508 4319 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AL137141.1-201ENST00000624622 4836 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC093655.2-201ENST00000425735 631 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 DNAJC19P7-201ENST00000428811 344 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 RPL31P44-201ENST00000447680 377 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 TCEA1P1-201ENST00000449716 880 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 RPL7P40-201ENST00000481703 745 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 OR7H2P-201ENST00000513483 306 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC104687.2-201ENST00000604442 342 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 AC011447.7-201ENST00000624228 1590 ntBASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHROOM3Q8TF72 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 IRF5P1-201ENST00000504852 2164 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 RN7SKP149-201ENST00000363008 344 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 SNORA73.1-201ENST00000363107 205 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 COX6B1P1-201ENST00000415962 213 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 NIFKP7-201ENST00000503365 834 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 RNA5SP43-201ENST00000516559 110 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms