Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RPL5P13-201ENST00000462840 709 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC116337.2-201ENST00000477662 156 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC005017.1-201ENST00000482002 490 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC022206.1-201ENST00000495947 347 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 SNORA58-201ENST00000505219 137 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 SUMO2P7-201ENST00000511179 285 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 Vault.2-201ENST00000516519 98 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC009729.1-201ENST00000548873 1133 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 HIGD1AP17-201ENST00000554576 276 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC006530.1-201ENST00000555980 571 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AL391840.1-201ENST00000571144 367 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AL589863.1-201ENST00000595383 631 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC018714.1-201ENST00000605028 208 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 MRPL57P1-201ENST00000621486 265 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AL683826.1-201ENST00000624104 627 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 AL133268.1-201ENST00000405676 1401 ntBASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.58□□□□□ -1.2
NEDD1Q8NHV4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CASC19-246ENST00000641625 1606 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP232-201ENST00000364144 119 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.356-201ENST00000365475 113 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RNU6-1005P-201ENST00000384519 107 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 Y_RNA.548-201ENST00000384656 105 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MIR1275-201ENST00000408770 80 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RN7SKP58-201ENST00000411010 305 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RANP4-201ENST00000413361 655 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CEACAMP8-201ENST00000413902 580 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 OSTCP4-201ENST00000424397 449 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RAC1P8-201ENST00000427086 527 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AL121776.1-201ENST00000429337 372 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 GAPDHP59-201ENST00000435908 267 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 YWHAZP2-201ENST00000440317 728 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 Z99127.2-201ENST00000441426 334 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 PCNPP2-201ENST00000441651 455 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC016908.1-201ENST00000442571 1219 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC244505.3-201ENST00000454598 187 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC019084.1-201ENST00000457337 432 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RPL5P24-201ENST00000463742 885 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC104339.1-201ENST00000465478 348 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 OR9A1P-202ENST00000484361 945 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC112484.3-201ENST00000505910 329 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC018797.1-201ENST00000510791 255 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AC026782.1-201ENST00000512952 449 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 RNU6-358P-201ENST00000516564 75 ntBASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.57□□□□□ -1.2
NEDD1Q8NHV4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms