Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC168Q8NDH2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 RNU1-74P-201ENST00000384108 171 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 ATP5F1P3-201ENST00000397213 657 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 RPL36AP36-201ENST00000418616 301 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 OR4C10P-201ENST00000434991 931 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 NOP56P2-201ENST00000447491 769 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 SNORD125-201ENST00000459538 96 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC010350.1-201ENST00000504908 231 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC012339.2-201ENST00000523996 453 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC067852.5-201ENST00000589299 310 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC022916.3-201ENST00000592961 742 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 MAPK10-263ENST00000641052 4307 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 SMG1P7-201ENST00000565246 2704 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC006210.2-201ENST00000367074 1545 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 HYALP1-201ENST00000417674 1279 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 GAPDHP49-201ENST00000421421 961 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 CEACAMP6-201ENST00000452007 574 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 RPL12P39-201ENST00000455456 496 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 CYCSP34-201ENST00000458172 304 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC006427.1-201ENST00000514359 712 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 RNA5SP392-201ENST00000516905 112 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 AL359715.3-201ENST00000569267 2123 ntBASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC168Q8NDH2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 Z97832.1-201ENST00000402490 328 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 AC124944.2-201ENST00000429866 1242 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 RPL6P5-201ENST00000445678 828 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 AC091912.1-201ENST00000511351 248 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 RNU1-45P-201ENST00000517191 141 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 OR4A6P-201ENST00000534364 970 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 H3F3BP2-201ENST00000583907 357 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 AC008782.1-201ENST00000603386 430 ntBASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC168Q8NDH2 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 CYP1D1P-201ENST00000416662 1433 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 NCLP2-201ENST00000416078 1462 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 RNA5SP509-201ENST00000364577 119 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 RNA5SP251-201ENST00000410614 137 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 HMGB1P4-201ENST00000455362 567 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 AP003080.1-202ENST00000526526 915 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 AC008814.1-201ENST00000603797 406 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms