Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR375-201ENST00000362103 64 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 RNA5SP131-201ENST00000365452 119 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC013262.1-201ENST00000426710 252 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 RRM2P4-201ENST00000441721 562 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AL139824.2-201ENST00000458731 1095 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 RN7SL188P-201ENST00000469842 285 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 RN7SL583P-201ENST00000475692 287 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC104982.1-201ENST00000478775 574 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 HMGB1P46-201ENST00000520062 610 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC034205.1-201ENST00000520621 638 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 OR8A2P-201ENST00000528631 952 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 MIR4271-201ENST00000582451 67 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 H3F3BP2-201ENST00000583907 357 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC008507.2-201ENST00000588402 1176 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC108865.2-201ENST00000606881 432 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 MIR8084-201ENST00000614105 89 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AC025574.2-201ENST00000615621 514 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLIP4Q8N3C7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 MAPK10-349ENST00000641767 3661 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SMG1P4-204ENST00000523028 4131 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 OR52B3P-201ENST00000314715 928 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SEPT7P8-201ENST00000413308 775 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SEPT7P7-201ENST00000420492 1301 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 MTND6P5-201ENST00000448266 512 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 PSAT1P4-201ENST00000466500 526 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 UBFD1P1-201ENST00000473259 814 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RN7SL205P-201ENST00000490174 284 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RN7SL649P-201ENST00000496974 275 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AK4P6-201ENST00000505168 528 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC021106.1-201ENST00000509020 1058 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC090568.1-201ENST00000509499 856 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC091912.1-201ENST00000511351 248 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RNU5A-7P-201ENST00000515979 116 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 RNU6-615P-201ENST00000516065 106 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 TOMM20P1-201ENST00000534518 427 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 NANOGNBP2-201ENST00000544753 553 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC093014.1-201ENST00000548926 724 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 GLRXP2-201ENST00000555594 321 ntBASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.1□□□□□ -1.59
CLIP4Q8N3C7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms