Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AC239868.2-201ENST00000564237 4527 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 SMG1P7-201ENST00000565246 2704 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 SNORD113.2-201ENST00000364166 89 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 RNU4-25P-201ENST00000410569 230 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 AK3P4-201ENST00000504283 583 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 AP002981.1-201ENST00000517692 975 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 AC007497.1-201ENST00000610421 561 ntBASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.34□□□□□ -1.23
CCDC141Q6ZP82 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
CCDC141Q6ZP82 AL442639.1-201ENST00000625030 1899 ntBASIC7.34□□□□□ -1.24
CCDC141Q6ZP82 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC7.34□□□□□ -1.24
CCDC141Q6ZP82 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RPL12P9-201ENST00000412942 488 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 ATG4AP1-201ENST00000416893 538 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AL354868.1-201ENST00000417077 482 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 GLUD1P9-201ENST00000420997 1173 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RSL24D1P6-201ENST00000426934 401 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 NPM1P18-201ENST00000434232 732 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 DPPA3P2-201ENST00000553589 478 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 MIR4277-201ENST00000578298 84 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RPL12P25-202ENST00000598100 674 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AC018695.5-201ENST00000605872 315 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AL359757.1-201ENST00000623176 255 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
CCDC141Q6ZP82 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 NUTF2P7-201ENST00000453086 375 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 MIR5699-201ENST00000578903 90 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC022726.1-201ENST00000587475 207 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AL121873.1-201ENST00000616013 524 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AL049794.2-201ENST00000616301 365 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 AC125257.1-201ENST00000560400 2930 ntBASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC141Q6ZP82 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 MRPS21P2-201ENST00000424704 264 ntBASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 AL161722.1-201ENST00000446972 1032 ntBASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 AC013356.1-201ENST00000489027 564 ntBASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 RN7SKP92-201ENST00000517266 244 ntBASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 PRPF19P1-201ENST00000584766 898 ntBASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
CCDC141Q6ZP82 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms