Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 OR5H7P-201ENST00000514084 930 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 snoZ278.1-201ENST00000517059 112 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 HMGN1P26-201ENST00000558737 303 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC007346.2-201ENST00000564816 892 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 CCDC58P3-201ENST00000590792 430 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AL035411.2-201ENST00000604022 421 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC008555.7-201ENST00000605008 583 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC022001.1-201ENST00000605193 268 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC009464.1-201ENST00000615731 469 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AL121895.2-201ENST00000619558 447 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 AC089999.3-201ENST00000622440 577 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.67□□□□□ -1.5
RNF220Q5VTB9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF220Q5VTB9 MRE11P1-201ENST00000464884 2127 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC01613-201ENST00000561476 2780 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RPL11P4-201ENST00000332269 436 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RNU1-87P-201ENST00000363727 170 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RNA5SP77-201ENST00000365394 120 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR52E6-202ENST00000379946 954 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MIR551B-201ENST00000384984 96 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 SNORA11C-201ENST00000408532 129 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 SNORA77.2-201ENST00000408571 112 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 GPS2P1-201ENST00000411761 986 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 GNG5P5-201ENST00000420444 220 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MGAT2P2-201ENST00000427194 797 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL031663.1-201ENST00000437445 219 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR3D1P-201ENST00000438288 955 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 ARMC4P1-201ENST00000438905 707 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC073052.1-201ENST00000440417 714 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MTND1P26-201ENST00000440488 538 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 PA2G4P1-201ENST00000442248 1197 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RPS23P9-201ENST00000448848 438 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL162739.1-201ENST00000450606 307 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 RPS6P2-201ENST00000454208 705 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AL035404.1-201ENST00000497982 568 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 snoU109.6-201ENST00000516831 118 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 Y_RNA.710-201ENST00000516975 110 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 MTCO3P15-201ENST00000526563 574 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 OR8A2P-201ENST00000528631 952 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF220Q5VTB9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms