Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN20P56880 FRG1DP-201ENST00000635586 771 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 HSPD1P7-201ENST00000447985 1686 ntBASIC5.04□□□□□ -1.6
CLDN20P56880 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN20P56880 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.04□□□□□ -1.6
CLDN20P56880 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CLDN20P56880 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN20P56880 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN20P56880 ADAM5-202ENST00000399789 1942 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN20P56880 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 RN7SKP124-201ENST00000364730 341 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 AC005042.1-201ENST00000393397 800 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 GNG5P5-201ENST00000420444 220 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AL121776.1-201ENST00000429337 372 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN20P56880 MRPL50P1-201ENST00000431951 384 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 TMEM183AP1-205ENST00000432739 290 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AL512661.1-201ENST00000434586 1253 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AC019185.1-201ENST00000442718 389 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN20P56880 AL353898.1-201ENST00000444055 238 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN20P56880 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLDN20P56880 RN7SKP157-201ENST00000516174 282 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 NRBF2P4-201ENST00000520874 850 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 MTND1P6-201ENST00000523621 946 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 SOX5P1-201ENST00000524155 1127 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 OR8A2P-201ENST00000528631 952 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN20P56880 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN20P56880 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 FAM106CP-201ENST00000582212 507 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AP001033.2-201ENST00000609701 1003 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AC005156.1-201ENST00000613371 573 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AC025574.2-201ENST00000615621 514 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AL445528.2-201ENST00000620582 470 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 SAMMSON-227ENST00000642114 1199 ntBASIC5.03□□□□□ -1.6
CLDN20P56880 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN20P56880 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN20P56880 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN20P56880 AC144833.1-201ENST00000567953 4089 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN20P56880 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLDN20P56880 ZNF90P1-201ENST00000480493 1951 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CLDN20P56880 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN20P56880 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 SNORA51.1-201ENST00000363243 140 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 RN7SKP28-201ENST00000364770 305 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 RNU6-31P-201ENST00000384388 108 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLDN20P56880 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN20P56880 AL009179.1-201ENST00000406085 265 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC069282.1-201ENST00000411911 526 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 CTSL3P-202ENST00000412179 788 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AL606495.1-201ENST00000422100 813 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC093084.1-201ENST00000424233 687 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN20P56880 PRUNEP1-201ENST00000425846 705 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN20P56880 RNFT1P2-201ENST00000443064 757 ntBASIC5.02□□□□□ -1.61
CLDN20P56880 AC012512.1-201ENST00000446594 718 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms