Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 IMPA1P1-201ENST00000510718 842 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.78□□□□□ -1.48
HMGCS2P54868 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS2P54868 MIR5096-201ENST00000583713 70 ntBASIC5.78□□□□□ -1.48
HMGCS2P54868 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS2P54868 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.78□□□□□ -1.48
HMGCS2P54868 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HMGCS2P54868 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.78□□□□□ -1.48
HMGCS2P54868 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HMGCS2P54868 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.48
HMGCS2P54868 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 AC005261.2-201ENST00000593427 4258 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGCS2P54868 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HMGCS2P54868 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS2P54868 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HMGCS2P54868 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS2P54868 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 CYCSP42-201ENST00000450823 238 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 BX842559.2-201ENST00000451418 605 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 snoU13.1-201ENST00000459157 104 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 RN7SL197P-201ENST00000466981 299 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 AC111000.3-201ENST00000508057 576 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 RNA5SP392-201ENST00000516905 112 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 AC034205.1-201ENST00000520621 638 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 SOX5P1-201ENST00000524155 1127 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 TVP23CP2-201ENST00000571473 623 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 RPL26P30-202ENST00000602923 645 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.77□□□□□ -1.49
HMGCS2P54868 AC091932.2-201ENST00000623014 291 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 AC026951.1-201ENST00000559530 2459 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.77□□□□□ -1.49
HMGCS2P54868 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.77□□□□□ -1.49
HMGCS2P54868 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
HMGCS2P54868 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS2P54868 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS2P54868 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HMGCS2P54868 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HMGCS2P54868 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 MAPK10-263ENST00000641052 4307 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 RPL34P27-201ENST00000428810 349 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 NRBF2P3-201ENST00000432731 865 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC005154.2-201ENST00000438110 379 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AC023271.1-201ENST00000445936 1090 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.76□□□□□ -1.49
HMGCS2P54868 HMGB1P4-201ENST00000455362 567 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC021193.1-201ENST00000511607 420 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.76□□□□□ -1.49
HMGCS2P54868 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.76□□□□□ -1.49
HMGCS2P54868 MIR6853-201ENST00000619642 74 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 AC087821.1-201ENST00000623639 567 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC016745.2-201ENST00000608834 3443 ntBASIC5.76□□□□□ -1.49
HMGCS2P54868 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
HMGCS2P54868 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
HMGCS2P54868 AC090220.1-201ENST00000593078 1699 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 OR4G1P-202ENST00000641173 1788 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGCS2P54868 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 BX510359.2-201ENST00000417920 305 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGCS2P54868 RPL18P10-201ENST00000425606 538 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.75□□□□□ -1.49
HMGCS2P54868 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGCS2P54868 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms