Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DNAJC19P3-201ENST00000594491 331 ntBASIC5.33□□□□□ -1.56
CLCNKAP51800 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCNKAP51800 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 AC008115.4-201ENST00000619780 775 ntBASIC5.33□□□□□ -1.56
CLCNKAP51800 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCNKAP51800 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 AC136428.4-201ENST00000634254 1155 ntBASIC5.33□□□□□ -1.56
CLCNKAP51800 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 AC074101.1-201ENST00000637861 241 ntBASIC5.33□□□□□ -1.56
CLCNKAP51800 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCNKAP51800 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCNKAP51800 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCNKAP51800 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 AC019072.1-201ENST00000604535 1551 ntBASIC5.33□□□□□ -1.56
CLCNKAP51800 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCNKAP51800 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCNKAP51800 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCNKAP51800 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 PABPC1P6-201ENST00000445594 1829 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLCNKAP51800 SNORD51.1-201ENST00000365405 77 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 SNORD56.6-201ENST00000384569 71 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AL158827.1-201ENST00000416300 391 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.32□□□□□ -1.56
CLCNKAP51800 HMGN2P27-201ENST00000427352 270 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 RPS11P7-201ENST00000442125 465 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC108729.2-201ENST00000476543 840 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 RN7SL30P-201ENST00000488416 306 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC109464.1-201ENST00000511091 819 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 HMGB1P40-201ENST00000525121 540 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC008147.3-201ENST00000548666 354 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.32□□□□□ -1.56
CLCNKAP51800 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC079148.1-201ENST00000565944 819 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC005341.1-201ENST00000571086 708 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 MIR4675-201ENST00000577898 77 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 RBM22P1-201ENST00000578589 1214 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 OR7E18P-201ENST00000592589 702 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 BNIP3P27-201ENST00000599991 412 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC242628.1-201ENST00000606810 391 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.32□□□□□ -1.56
CLCNKAP51800 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 uc_338.7-201ENST00000621834 124 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC073869.8-201ENST00000641806 335 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CLCNKAP51800 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLCNKAP51800 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.32□□□□□ -1.56
CLCNKAP51800 AC114774.1-201ENST00000507410 1770 ntBASIC5.32□□□□□ -1.56
CLCNKAP51800 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCNKAP51800 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLCNKAP51800 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC092681.1-201ENST00000297369 291 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 OR9K1P-201ENST00000326513 941 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLCNKAP51800 RNU1-146P-201ENST00000364015 165 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 RNA5SP187-201ENST00000384400 119 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 U3.28-201ENST00000391249 210 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms