Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CSNK1A1P48729 AC073136.1-201ENST00000449426 2884 ntBASIC4.6□□□□□ -1.67
CSNK1A1P48729 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSNK1A1P48729 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CSNK1A1P48729 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CSNK1A1P48729 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSNK1A1P48729 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 RNU4-44P-201ENST00000363050 141 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 VDAC2P1-201ENST00000399358 958 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 ADAM5-202ENST00000399789 1942 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC233289.1-201ENST00000403700 508 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 NUDT19P3-201ENST00000404698 555 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 MIR1286-201ENST00000408112 78 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC098592.2-201ENST00000413158 265 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 COX5BP7-201ENST00000414780 274 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 VN1R31P-201ENST00000417498 730 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 RAB9AP5-201ENST00000437794 597 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 RAB9AP2-201ENST00000443911 597 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 RPL7AP10-201ENST00000481016 791 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 RPS21P4-201ENST00000487122 248 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC024558.1-201ENST00000505008 528 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC097173.1-201ENST00000505862 819 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 RNU6-513P-201ENST00000516104 104 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 EIF4A2P5-201ENST00000529914 499 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AP001804.2-201ENST00000533932 910 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC006349.1-201ENST00000555526 235 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSNK1A1P48729 MIR4675-201ENST00000577898 77 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 AC067838.1-201ENST00000606064 577 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 AP005131.7-201ENST00000610087 611 ntBASIC4.59□□□□□ -1.67
CSNK1A1P48729 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.59□□□□□ -1.67
CSNK1A1P48729 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.59□□□□□ -1.68
CSNK1A1P48729 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CSNK1A1P48729 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.59□□□□□ -1.68
CSNK1A1P48729 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CSNK1A1P48729 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 TCP1P3-201ENST00000414406 1498 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC235565.1-201ENST00000456962 1325 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 RNU1-43P-201ENST00000365052 165 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSNK1A1P48729 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 RPS4XP16-201ENST00000427198 791 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC009238.2-201ENST00000431026 355 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC020779.1-201ENST00000478757 796 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 MYL12BP2-201ENST00000503948 512 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC100784.1-201ENST00000522790 310 ntBASIC4.58□□□□□ -1.68
CSNK1A1P48729 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.58□□□□□ -1.68
CSNK1A1P48729 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms