Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 AC091544.1-201ENST00000484702 348 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 OR11I1P-201ENST00000486033 954 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 AC008953.1-201ENST00000497334 318 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 AC097173.1-201ENST00000505862 819 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.01□□□□□ -1.61
SHMT2P34897 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHMT2P34897 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.01□□□□□ -1.61
SHMT2P34897 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.01□□□□□ -1.61
SHMT2P34897 AC016180.1-201ENST00000567945 403 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 AC006116.3-201ENST00000592968 361 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.01□□□□□ -1.61
SHMT2P34897 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.01□□□□□ -1.61
SHMT2P34897 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHMT2P34897 AL031595.2-201ENST00000624215 19071 ntBASIC5.01□□□□□ -1.61
SHMT2P34897 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.01□□□□□ -1.61
SHMT2P34897 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHMT2P34897 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.01□□□□□ -1.61
SHMT2P34897 TCP1P3-201ENST00000414406 1498 ntBASIC5□□□□□ -1.61
SHMT2P34897 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 UQCRC2P1-201ENST00000417777 1332 ntBASIC5□□□□□ -1.61
SHMT2P34897 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 RN7SKP113-201ENST00000363891 295 ntBASIC5□□□□□ -1.61
SHMT2P34897 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5□□□□□ -1.61
SHMT2P34897 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5□□□□□ -1.61
SHMT2P34897 DPPA2P3-201ENST00000411853 655 ntBASIC5□□□□□ -1.61
SHMT2P34897 RPL23AP27-201ENST00000415161 451 ntBASIC5□□□□□ -1.61
SHMT2P34897 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5□□□□□ -1.61
SHMT2P34897 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5□□□□□ -1.61
SHMT2P34897 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5□□□□□ -1.61
SHMT2P34897 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5□□□□□ -1.61
SHMT2P34897 BX842559.2-201ENST00000451418 605 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC097484.1-201ENST00000471148 389 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC112184.1-201ENST00000505179 312 ntBASIC5□□□□□ -1.61
SHMT2P34897 OR5M14P-201ENST00000506803 618 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5□□□□□ -1.61
SHMT2P34897 RN7SKP5-201ENST00000517045 272 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 OR8A2P-201ENST00000528631 952 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5□□□□□ -1.61
SHMT2P34897 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 MIR3691-201ENST00000578066 90 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC022884.2-201ENST00000578535 580 ntBASIC5□□□□□ -1.61
SHMT2P34897 AC211433.2-201ENST00000608433 387 ntBASIC5□□□□□ -1.61
SHMT2P34897 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5□□□□□ -1.61
SHMT2P34897 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5□□□□□ -1.61
SHMT2P34897 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 LINC01739-205ENST00000641890 573 ntBASIC5□□□□□ -1.61
SHMT2P34897 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SHMT2P34897 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
SHMT2P34897 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHMT2P34897 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5□□□□□ -1.61
SHMT2P34897 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5□□□□□ -1.61
SHMT2P34897 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.99□□□□□ -1.61
SHMT2P34897 HSPA8P18-201ENST00000439846 1928 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 AC104260.2-201ENST00000623551 3497 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.99□□□□□ -1.61
SHMT2P34897 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHMT2P34897 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.99□□□□□ -1.61
SHMT2P34897 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHMT2P34897 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHMT2P34897 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHMT2P34897 RNA5SP305-201ENST00000362665 119 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 UBBP2-201ENST00000376781 231 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 SNORA70-201ENST00000384436 135 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHMT2P34897 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHMT2P34897 AC104333.2-201ENST00000422630 192 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.99□□□□□ -1.61
SHMT2P34897 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.99□□□□□ -1.61
SHMT2P34897 CEACAMP7-201ENST00000444105 496 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 RNU7-157P-201ENST00000459600 66 ntBASIC4.99□□□□□ -1.61
SHMT2P34897 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.99□□□□□ -1.61
SHMT2P34897 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.99□□□□□ -1.61
SHMT2P34897 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.99□□□□□ -1.61
SHMT2P34897 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.99□□□□□ -1.61
SHMT2P34897 RN7SKP66-201ENST00000516681 231 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms