Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.85□□□□□ -1.15
CLIP1P30622 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.85□□□□□ -1.15
CLIP1P30622 AC092376.2-201ENST00000622621 4116 ntBASIC7.85□□□□□ -1.15
CLIP1P30622 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CLIP1P30622 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP1P30622 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP1P30622 RPS16P5-201ENST00000406501 404 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 AL645608.4-201ENST00000423619 154 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 C4BPAP2-201ENST00000428434 478 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 AC091390.1-201ENST00000433904 331 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 CYCSP11-201ENST00000436426 315 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC7.84□□□□□ -1.15
CLIP1P30622 NDUFA5P9-201ENST00000472609 340 ntBASIC7.84□□□□□ -1.15
CLIP1P30622 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP1P30622 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.84□□□□□ -1.15
CLIP1P30622 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CLIP1P30622 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.84□□□□□ -1.16
CLIP1P30622 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.83□□□□□ -1.16
CLIP1P30622 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CLIP1P30622 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
CLIP1P30622 AC011447.7-201ENST00000624228 1590 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.83□□□□□ -1.16
CLIP1P30622 TPT1P12-201ENST00000448968 492 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 AL356390.1-201ENST00000455684 397 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 AC011005.3-201ENST00000491624 395 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.83□□□□□ -1.16
CLIP1P30622 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.83□□□□□ -1.16
CLIP1P30622 DPPA3P2-201ENST00000553589 478 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.83□□□□□ -1.16
CLIP1P30622 AC019193.2-201ENST00000610012 634 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.83□□□□□ -1.16
CLIP1P30622 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
CLIP1P30622 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
CLIP1P30622 AC022893.2-201ENST00000564832 3296 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CLIP1P30622 AC008758.3-201ENST00000507003 1829 ntBASIC7.83□□□□□ -1.16
CLIP1P30622 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLIP1P30622 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLIP1P30622 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 AC009643.2-201ENST00000603543 1448 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
CLIP1P30622 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.82□□□□□ -1.16
CLIP1P30622 OR2B7P-201ENST00000429302 934 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.82□□□□□ -1.16
CLIP1P30622 RN7SL354P-201ENST00000469282 294 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC7.82□□□□□ -1.16
CLIP1P30622 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 AP001880.2-201ENST00000538233 448 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 NPM1P5-201ENST00000557228 838 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 AC010424.2-201ENST00000607594 443 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 AL049794.2-201ENST00000616301 365 ntBASIC7.82□□□□□ -1.16
CLIP1P30622 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
CLIP1P30622 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
CLIP1P30622 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
CLIP1P30622 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.82□□□□□ -1.16
CLIP1P30622 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP1P30622 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP1P30622 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.81□□□□□ -1.16
CLIP1P30622 AC126755.2-208ENST00000327792 462 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 AC138969.1-213ENST00000331436 462 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 DNAJC19P7-201ENST00000428811 344 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.81□□□□□ -1.16
CLIP1P30622 AC092905.1-201ENST00000467527 949 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP1P30622 AL049839.1-201ENST00000556151 657 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP1P30622 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP1P30622 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CLIP1P30622 AC022417.1-201ENST00000624768 1303 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
CLIP1P30622 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP1P30622 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.81□□□□□ -1.16
CLIP1P30622 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP1P30622 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CLIP1P30622 AC010928.1-201ENST00000592477 1447 ntBASIC7.81□□□□□ -1.16
CLIP1P30622 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC7.8□□□□□ -1.16
CLIP1P30622 LCMT1-AS2-202ENST00000565214 5666 ntBASIC7.8□□□□□ -1.16
CLIP1P30622 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 BX510359.2-201ENST00000417920 305 ntBASIC7.8□□□□□ -1.16
CLIP1P30622 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP1P30622 CYCSP42-201ENST00000450823 238 ntBASIC7.8□□□□□ -1.16
CLIP1P30622 AC021660.1-201ENST00000465006 554 ntBASIC7.8□□□□□ -1.16
CLIP1P30622 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
CLIP1P30622 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP1P30622 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP1P30622 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CLIP1P30622 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CLIP1P30622 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.8□□□□□ -1.16
CLIP1P30622 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.8□□□□□ -1.16
CLIP1P30622 AGGF1P9-201ENST00000561884 913 ntBASIC7.8□□□□□ -1.16
CLIP1P30622 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC7.8□□□□□ -1.16
CLIP1P30622 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.8□□□□□ -1.16
CLIP1P30622 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CLIP1P30622 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms