Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP001264.1-201ENST00000620602 703 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC124312.6-202ENST00000623624 418 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC092184.1-201ENST00000625042 715 ntBASIC5.63□□□□□ -1.51
CD40P25942 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AC127502.3-201ENST00000636170 1206 ntBASIC5.63□□□□□ -1.51
CD40P25942 LINC02495-203ENST00000636704 242 ntBASIC5.63□□□□□ -1.51
CD40P25942 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 AL121936.2-201ENST00000641935 662 ntBASIC5.63□□□□□ -1.51
CD40P25942 EIF3EP1-201ENST00000433978 1316 ntBASIC5.63□□□□□ -1.51
CD40P25942 AC083806.2-201ENST00000617795 2685 ntBASIC5.63□□□□□ -1.51
CD40P25942 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 CLCA3P-203ENST00000490028 2781 ntBASIC5.63□□□□□ -1.51
CD40P25942 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CD40P25942 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.63□□□□□ -1.51
CD40P25942 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 AL596244.1-201ENST00000567068 3779 ntBASIC5.63□□□□□ -1.51
CD40P25942 LYARP1-201ENST00000436977 1501 ntBASIC5.63□□□□□ -1.51
CD40P25942 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.63□□□□□ -1.51
CD40P25942 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD40P25942 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.62□□□□□ -1.51
CD40P25942 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 AC011592.1-201ENST00000624647 3634 ntBASIC5.62□□□□□ -1.51
CD40P25942 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 Y_RNA.18-201ENST00000362461 102 ntBASIC5.62□□□□□ -1.51
CD40P25942 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 Y_RNA.553-201ENST00000384670 102 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC003045.1-201ENST00000398779 713 ntBASIC5.62□□□□□ -1.51
CD40P25942 VDAC2P1-201ENST00000399358 958 ntBASIC5.62□□□□□ -1.51
CD40P25942 SNORA11.5-201ENST00000408163 128 ntBASIC5.62□□□□□ -1.51
CD40P25942 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 AL049610.1-201ENST00000423374 372 ntBASIC5.62□□□□□ -1.51
CD40P25942 VN1R20P-201ENST00000425215 966 ntBASIC5.62□□□□□ -1.51
CD40P25942 MED14P1-201ENST00000430517 648 ntBASIC5.62□□□□□ -1.51
CD40P25942 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 MTND1P30-201ENST00000441241 901 ntBASIC5.62□□□□□ -1.51
CD40P25942 RBMY3AP-201ENST00000449381 1145 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 RN7SL705P-201ENST00000481678 294 ntBASIC5.62□□□□□ -1.51
CD40P25942 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 MTATP6P22-201ENST00000507369 598 ntBASIC5.62□□□□□ -1.51
CD40P25942 RNA5SP418-201ENST00000515951 117 ntBASIC5.62□□□□□ -1.51
CD40P25942 RNU2-30P-201ENST00000516209 141 ntBASIC5.62□□□□□ -1.51
CD40P25942 RNA5SP473-201ENST00000516402 125 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 IGHV3-57-201ENST00000520143 280 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC008562.1-201ENST00000521763 330 ntBASIC5.62□□□□□ -1.51
CD40P25942 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 NANOGNBP2-201ENST00000544753 553 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 AC007599.1-201ENST00000568688 1174 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 AC104073.3-201ENST00000610942 955 ntBASIC5.62□□□□□ -1.51
CD40P25942 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.62□□□□□ -1.51
CD40P25942 AC007786.3-201ENST00000615154 596 ntBASIC5.62□□□□□ -1.51
CD40P25942 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.62□□□□□ -1.51
CD40P25942 AL031667.3-201ENST00000620124 655 ntBASIC5.62□□□□□ -1.51
CD40P25942 AL591926.1-201ENST00000620542 217 ntBASIC5.62□□□□□ -1.51
CD40P25942 AL683826.1-201ENST00000624104 627 ntBASIC5.62□□□□□ -1.51
CD40P25942 AC087565.3-203ENST00000641018 837 ntBASIC5.62□□□□□ -1.51
CD40P25942 MIR193BHG-214ENST00000641765 509 ntBASIC5.62□□□□□ -1.51
CD40P25942 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CD40P25942 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD40P25942 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.62□□□□□ -1.51
CD40P25942 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.62□□□□□ -1.51
CD40P25942 AL136531.3-201ENST00000624378 3658 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms