Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ATF4P18848 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.03□□□□□ -1.44
ATF4P18848 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC6.03□□□□□ -1.44
ATF4P18848 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ATF4P18848 AC016583.1-201ENST00000624221 2431 ntBASIC6.03□□□□□ -1.44
ATF4P18848 AL356361.1-201ENST00000400943 1459 ntBASIC6.02□□□□□ -1.44
ATF4P18848 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 MTND5P28-201ENST00000438005 1594 ntBASIC6.02□□□□□ -1.45
ATF4P18848 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AP002907.1-201ENST00000606361 1430 ntBASIC6.02□□□□□ -1.45
ATF4P18848 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 RNA5SP333-201ENST00000363466 118 ntBASIC6.02□□□□□ -1.45
ATF4P18848 RNA5SP334-201ENST00000364825 118 ntBASIC6.02□□□□□ -1.45
ATF4P18848 RN7SKP186-201ENST00000365371 303 ntBASIC6.02□□□□□ -1.45
ATF4P18848 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 Y_RNA.516-201ENST00000384541 124 ntBASIC6.02□□□□□ -1.45
ATF4P18848 RPSAP42-201ENST00000403415 878 ntBASIC6.02□□□□□ -1.45
ATF4P18848 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 HMGN1P14-201ENST00000412459 517 ntBASIC6.02□□□□□ -1.45
ATF4P18848 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 AC113412.1-201ENST00000425840 504 ntBASIC6.02□□□□□ -1.45
ATF4P18848 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATF4P18848 AL357632.1-201ENST00000426688 643 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.02□□□□□ -1.45
ATF4P18848 TUBB4BP6-201ENST00000437576 479 ntBASIC6.02□□□□□ -1.45
ATF4P18848 ACTP1-201ENST00000440793 383 ntBASIC6.02□□□□□ -1.45
ATF4P18848 RPL5P10-201ENST00000445207 894 ntBASIC6.02□□□□□ -1.45
ATF4P18848 OR7H1P-201ENST00000448965 922 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 TXNP3-201ENST00000454560 301 ntBASIC6.02□□□□□ -1.45
ATF4P18848 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 RN7SL854P-201ENST00000459767 295 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC026410.2-201ENST00000460281 156 ntBASIC6.02□□□□□ -1.45
ATF4P18848 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 OR52A4P-201ENST00000472867 958 ntBASIC6.02□□□□□ -1.45
ATF4P18848 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
ATF4P18848 AC026254.1-201ENST00000479473 431 ntBASIC6.02□□□□□ -1.45
ATF4P18848 RN7SL403P-201ENST00000481783 305 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC005726.1-201ENST00000494679 427 ntBASIC6.02□□□□□ -1.45
ATF4P18848 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.02□□□□□ -1.45
ATF4P18848 AC096751.1-202ENST00000502691 1067 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.02□□□□□ -1.45
ATF4P18848 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 AC112225.1-201ENST00000508230 297 ntBASIC6.02□□□□□ -1.45
ATF4P18848 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 NTAN1P2-201ENST00000515730 940 ntBASIC6.02□□□□□ -1.45
ATF4P18848 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.02□□□□□ -1.45
ATF4P18848 SCARNA20.3-201ENST00000516913 131 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC6.02□□□□□ -1.45
ATF4P18848 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.02□□□□□ -1.45
ATF4P18848 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 AC005230.1-201ENST00000555418 285 ntBASIC6.02□□□□□ -1.45
ATF4P18848 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.02□□□□□ -1.45
ATF4P18848 AC136619.2-201ENST00000563361 631 ntBASIC6.02□□□□□ -1.45
ATF4P18848 MIR4437-201ENST00000581331 60 ntBASIC6.02□□□□□ -1.45
ATF4P18848 MAGOH2P-202ENST00000584384 429 ntBASIC6.02□□□□□ -1.45
ATF4P18848 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC080013.4-201ENST00000607624 649 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC097468.3-201ENST00000607956 456 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AP005329.3-201ENST00000609924 686 ntBASIC6.02□□□□□ -1.45
ATF4P18848 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC026368.1-201ENST00000614934 690 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AC108479.2-201ENST00000617314 601 ntBASIC6.02□□□□□ -1.45
ATF4P18848 AL357080.1-201ENST00000617394 239 ntBASIC6.02□□□□□ -1.45
ATF4P18848 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ATF4P18848 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ATF4P18848 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.02□□□□□ -1.45
ATF4P18848 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms