Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPRFP10586 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPRFP10586 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PTPRFP10586 Z98755.1-201ENST00000407015 1384 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 RNA5SP479-201ENST00000364858 117 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPRFP10586 TBCAP2-201ENST00000416175 326 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 RPS5P7-201ENST00000456664 608 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 CR383656.1-201ENST00000484916 377 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPRFP10586 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 RN7SKP122-201ENST00000515923 296 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 AC009643.1-201ENST00000532030 391 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPRFP10586 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 AL133338.2-201ENST00000604292 736 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 AC068724.3-201ENST00000625906 87 ntBASIC5.67□□□□□ -1.5
PTPRFP10586 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPRFP10586 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPRFP10586 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPRFP10586 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPRFP10586 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC234779.1-201ENST00000425910 285 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC073143.1-201ENST00000436316 395 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 CEACAMP6-201ENST00000452007 574 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 OR11I1P-201ENST00000486033 954 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC111000.3-201ENST00000508057 576 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 SNORA70.11-201ENST00000515987 138 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 SNORA70.13-201ENST00000516116 138 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 MIR3160-1-201ENST00000577972 85 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPRFP10586 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 RNA5SP439-201ENST00000617595 124 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 MIR6853-201ENST00000619642 74 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC007382.1-201ENST00000624376 2618 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPRFP10586 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPRFP10586 Y_RNA.126-201ENST00000363382 111 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPRFP10586 GLUD1P9-201ENST00000420997 1173 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC097523.2-201ENST00000435551 652 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC073052.1-201ENST00000440417 714 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPRFP10586 snoU13.1-201ENST00000459157 104 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC011276.1-201ENST00000469688 323 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPRFP10586 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPRFP10586 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC026402.1-201ENST00000513642 170 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC027369.5-201ENST00000533838 755 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC002069.2-201ENST00000603580 883 ntBASIC5.66□□□□□ -1.5
PTPRFP10586 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.66□□□□□ -1.5
PTPRFP10586 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.66□□□□□ -1.5
PTPRFP10586 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PTPRFP10586 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
PTPRFP10586 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPRFP10586 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPRFP10586 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PTPRFP10586 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PTPRFP10586 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PTPRFP10586 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PTPRFP10586 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTPRFP10586 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
PTPRFP10586 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.65□□□□□ -1.5
PTPRFP10586 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTPRFP10586 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PTPRFP10586 RNA5SP447-201ENST00000363749 119 ntBASIC5.65□□□□□ -1.51
PTPRFP10586 SNORA70.2-201ENST00000364506 135 ntBASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms