Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OR8K2P-201ENST00000524645 927 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 OR8Q1P-201ENST00000526467 655 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC6P09630 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC6P09630 MIR7853-201ENST00000584820 132 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 AC015849.6-201ENST00000605454 474 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC6P09630 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC021422.1-201ENST00000621212 473 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
HOXC6P09630 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC6P09630 AC079298.1-201ENST00000625026 1619 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 AC100757.1-201ENST00000616872 1835 ntBASIC5.88□□□□□ -1.47
HOXC6P09630 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 MAPK10-338ENST00000641647 3362 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 AC015799.1-201ENST00000622996 3122 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC6P09630 U3.28-201ENST00000391249 210 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC6P09630 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC6P09630 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 NDUFB4P8-201ENST00000435351 367 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 AC114878.1-201ENST00000441166 358 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC6P09630 RN7SL459P-201ENST00000481078 302 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC6P09630 GCSHP4-201ENST00000538792 439 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC6P09630 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC209154.1-201ENST00000582156 337 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC6P09630 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 AL352984.2-202ENST00000613699 155 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 AC106858.1-201ENST00000637497 429 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.87□□□□□ -1.47
HOXC6P09630 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC6P09630 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC6P09630 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC6P09630 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC6P09630 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC6P09630 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC6P09630 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC6P09630 MSL3P1-202ENST00000440028 1468 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HOXC6P09630 PPIAP9-201ENST00000403866 498 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 RNU2-50P-201ENST00000410494 143 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC6P09630 AC007559.1-201ENST00000428736 355 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC124944.2-201ENST00000429866 1242 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC6P09630 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC6P09630 MTND4P15-201ENST00000437913 1033 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 AL672167.3-201ENST00000465951 960 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC093267.1-201ENST00000489176 961 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 AP001960.1-201ENST00000506494 658 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC6P09630 CCNHP1-201ENST00000513311 678 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 RN7SKP157-201ENST00000516174 282 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 RNA5SP43-201ENST00000516559 110 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC6P09630 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 OR5AN2P-201ENST00000534535 896 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AP006289.1-201ENST00000538089 277 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC6P09630 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 AC068790.4-201ENST00000602474 263 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AC104307.1-201ENST00000616142 196 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.86□□□□□ -1.47
HOXC6P09630 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC6P09630 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC6P09630 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms