Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP003400.3-201ENST00000624904 346 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
PDGFAP04085 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.76□□□□□ -1.33
PDGFAP04085 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 AC117529.2-201ENST00000512159 2068 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.76□□□□□ -1.33
PDGFAP04085 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.76□□□□□ -1.33
PDGFAP04085 UGT2B27P-201ENST00000505092 1620 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
PDGFAP04085 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.76□□□□□ -1.33
PDGFAP04085 AL022578.1-201ENST00000439330 1433 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 GDI2P1-201ENST00000429312 1336 ntBASIC6.76□□□□□ -1.33
PDGFAP04085 AC069222.1-201ENST00000608028 3360 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PDGFAP04085 RNA5SP114-201ENST00000363780 113 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 SNORA70.5-201ENST00000365519 135 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 RPL5P5-201ENST00000392009 893 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 PDCL3P5-201ENST00000398028 722 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC073264.1-201ENST00000411508 416 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 Z82198.3-201ENST00000421145 199 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 RPL5P34-201ENST00000426545 891 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC073069.1-201ENST00000428657 441 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC073464.1-201ENST00000429823 534 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AL731892.1-201ENST00000437364 1192 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AL451074.3-201ENST00000437709 472 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.75□□□□□ -1.33
PDGFAP04085 AL845321.1-201ENST00000444603 348 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.75□□□□□ -1.33
PDGFAP04085 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 MTCYBP18-201ENST00000501056 747 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 HMGB1P29-201ENST00000505659 499 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 SCARNA18.2-201ENST00000516882 84 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 OR5BK1P-201ENST00000550421 823 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 RN7SL66P-201ENST00000582099 264 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 UBE2V2P2-201ENST00000587677 504 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 MEMO1P5-201ENST00000604810 406 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC078909.2-201ENST00000620584 398 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 AC005753.1-201ENST00000623837 618 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 AL596275.2-203ENST00000641951 371 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
PDGFAP04085 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 AC126773.4-201ENST00000612545 3043 ntBASIC6.75□□□□□ -1.33
PDGFAP04085 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
PDGFAP04085 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.75□□□□□ -1.33
PDGFAP04085 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.75□□□□□ -1.33
PDGFAP04085 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms