Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 MIR192-201ENST00000384915 110 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 AC013442.1-201ENST00000397347 228 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA1P02708 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 RPS27AP6-201ENST00000427962 448 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 RPL7P11-201ENST00000437586 658 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 OR52J1P-201ENST00000450596 932 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA1P02708 AP002371.1-201ENST00000463604 433 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 AC063943.1-201ENST00000465434 453 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA1P02708 RN7SL319P-201ENST00000480656 221 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA1P02708 OR2A3P-201ENST00000493774 953 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA1P02708 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 NMNAT1P1-201ENST00000554095 876 ntBASIC5.59□□□□□ -1.51
CHRNA1P02708 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA1P02708 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA1P02708 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA1P02708 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA1P02708 TTC39DP-201ENST00000416781 1688 ntBASIC5.59□□□□□ -1.52
CHRNA1P02708 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA1P02708 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA1P02708 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA1P02708 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA1P02708 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CHRNA1P02708 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 BCORP1-203ENST00000513194 5093 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA1P02708 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 CASC19-255ENST00000641733 1385 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA1P02708 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA1P02708 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHRNA1P02708 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC245028.1-201ENST00000423259 256 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 AL137845.2-201ENST00000444292 988 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 IGHV5-78-201ENST00000450948 295 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 RN7SL814P-201ENST00000487715 300 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 RPS24P16-201ENST00000497294 392 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC010350.1-201ENST00000504908 231 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC097173.1-201ENST00000505862 819 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA1P02708 RN7SKP5-201ENST00000517045 272 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC008147.3-201ENST00000548666 354 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA1P02708 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA1P02708 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA1P02708 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC002069.2-201ENST00000603580 883 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC008745.1-201ENST00000604064 271 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AL161616.1-201ENST00000611867 286 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.58□□□□□ -1.52
CHRNA1P02708 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CHRNA1P02708 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.58□□□□□ -1.52
CHRNA1P02708 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 MTCO1P15-201ENST00000529569 1526 ntBASIC5.58□□□□□ -1.52
CHRNA1P02708 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CHRNA1P02708 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CHRNA1P02708 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.57□□□□□ -1.52
CHRNA1P02708 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CHRNA1P02708 AL138820.1-201ENST00000617901 5305 ntBASIC5.57□□□□□ -1.52
CHRNA1P02708 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CHRNA1P02708 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CHRNA1P02708 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CHRNA1P02708 Z97832.1-201ENST00000402490 328 ntBASIC5.57□□□□□ -1.52
CHRNA1P02708 BX119904.3-201ENST00000428194 957 ntBASIC5.57□□□□□ -1.52
CHRNA1P02708 MTND2P40-201ENST00000436718 841 ntBASIC5.57□□□□□ -1.52
CHRNA1P02708 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.57□□□□□ -1.52
CHRNA1P02708 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.57□□□□□ -1.52
CHRNA1P02708 OR7E125P-201ENST00000443450 846 ntBASIC5.57□□□□□ -1.52
CHRNA1P02708 TPT1P13-201ENST00000449760 499 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms