Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
COL4A1P02462 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A1P02462 RPL12P34-201ENST00000424532 479 ntBASIC5.87□□□□□ -1.47
COL4A1P02462 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A1P02462 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A1P02462 AC011276.1-201ENST00000469688 323 ntBASIC5.87□□□□□ -1.47
COL4A1P02462 AC100784.1-201ENST00000522790 310 ntBASIC5.87□□□□□ -1.47
COL4A1P02462 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A1P02462 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A1P02462 AC100847.1-201ENST00000611316 481 ntBASIC5.87□□□□□ -1.47
COL4A1P02462 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 AC125257.1-201ENST00000560400 2930 ntBASIC5.87□□□□□ -1.47
COL4A1P02462 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL4A1P02462 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL4A1P02462 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A1P02462 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A1P02462 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A1P02462 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 MIR298-201ENST00000401212 88 ntBASIC5.86□□□□□ -1.47
COL4A1P02462 NPM1P33-201ENST00000438918 872 ntBASIC5.86□□□□□ -1.47
COL4A1P02462 FHP1-201ENST00000442741 703 ntBASIC5.86□□□□□ -1.47
COL4A1P02462 TXNP2-201ENST00000443918 295 ntBASIC5.86□□□□□ -1.47
COL4A1P02462 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.86□□□□□ -1.47
COL4A1P02462 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A1P02462 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A1P02462 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.86□□□□□ -1.47
COL4A1P02462 ADAM24P-201ENST00000398655 2101 ntBASIC5.86□□□□□ -1.47
COL4A1P02462 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A1P02462 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL4A1P02462 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.86□□□□□ -1.47
COL4A1P02462 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A1P02462 MTCO1P15-201ENST00000529569 1526 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 AC140479.3-201ENST00000418944 1126 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL4A1P02462 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 RPS17P8-201ENST00000434525 335 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A1P02462 MTND4LP2-201ENST00000502312 285 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A1P02462 AC103792.1-201ENST00000603591 919 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A1P02462 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL4A1P02462 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 ADAM5-202ENST00000399789 1942 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL4A1P02462 RPS27AP6-201ENST00000427962 448 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.85□□□□□ -1.47
COL4A1P02462 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 RN7SL558P-201ENST00000497468 299 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.85□□□□□ -1.47
COL4A1P02462 AC005868.1-201ENST00000536421 331 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.85□□□□□ -1.47
COL4A1P02462 MIR4675-201ENST00000577898 77 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AC125494.2-201ENST00000602431 657 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AL121890.3-201ENST00000618494 516 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 AC068724.3-201ENST00000625906 87 ntBASIC5.85□□□□□ -1.47
COL4A1P02462 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL4A1P02462 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.85□□□□□ -1.47
COL4A1P02462 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A1P02462 OR56B2P-202ENST00000641377 2453 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 RAD17P1-201ENST00000418130 2042 ntBASIC5.84□□□□□ -1.47
COL4A1P02462 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A1P02462 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A1P02462 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A1P02462 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL4A1P02462 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A1P02462 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A1P02462 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms