Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
COL1A1P02452 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL1A1P02452 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AL645608.4-201ENST00000423619 154 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 CYCSP11-201ENST00000436426 315 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 OR1H1P-201ENST00000448731 937 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.97□□□□□ -1.45
COL1A1P02452 OR5M2P-201ENST00000529003 936 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 TOMM20P2-201ENST00000540082 421 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 NPM1P5-201ENST00000557228 838 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.97□□□□□ -1.45
COL1A1P02452 RNF138P2-201ENST00000603490 592 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AC098935.2-201ENST00000604222 466 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AC016717.3-201ENST00000624730 554 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.97□□□□□ -1.45
COL1A1P02452 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 AC092376.2-201ENST00000622621 4116 ntBASIC5.97□□□□□ -1.45
COL1A1P02452 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL1A1P02452 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.97□□□□□ -1.45
COL1A1P02452 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL1A1P02452 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL1A1P02452 RPL7P58-201ENST00000402913 758 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 RNA5SP345-201ENST00000410646 108 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 AC079809.1-201ENST00000415468 276 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.96□□□□□ -1.45
COL1A1P02452 AC009480.2-201ENST00000422916 432 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 AL161722.1-201ENST00000446972 1032 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 AC111000.3-201ENST00000508057 576 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.96□□□□□ -1.45
COL1A1P02452 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.96□□□□□ -1.45
COL1A1P02452 AC116553.2-201ENST00000564203 463 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 MRPS21P9-201ENST00000571150 257 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL1A1P02452 AC020910.2-201ENST00000603635 610 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.96□□□□□ -1.45
COL1A1P02452 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.96□□□□□ -1.45
COL1A1P02452 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL1A1P02452 DHX40P1-201ENST00000588725 1412 ntBASIC5.96□□□□□ -1.45
COL1A1P02452 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL1A1P02452 AL360270.2-201ENST00000562952 5985 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.96□□□□□ -1.46
COL1A1P02452 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.96□□□□□ -1.46
COL1A1P02452 MAPK10-263ENST00000641052 4307 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
COL1A1P02452 MIR298-201ENST00000401212 88 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 P2RY10P2-201ENST00000416730 913 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 AL136231.1-201ENST00000429407 730 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 TXNP2-201ENST00000443918 295 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 RPL12P20-201ENST00000475538 479 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 AC026979.1-201ENST00000492525 396 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL1A1P02452 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.96□□□□□ -1.46
COL1A1P02452 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.96□□□□□ -1.46
COL1A1P02452 AC245389.2-201ENST00000616023 576 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 AC242843.1-201ENST00000618702 573 ntBASIC5.96□□□□□ -1.46
COL1A1P02452 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL1A1P02452 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
COL1A1P02452 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.96□□□□□ -1.46
COL1A1P02452 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.96□□□□□ -1.46
COL1A1P02452 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.96□□□□□ -1.46
COL1A1P02452 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
COL1A1P02452 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.95□□□□□ -1.46
COL1A1P02452 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL1A1P02452 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms