Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MBD4O95243 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
MBD4O95243 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
MBD4O95243 SMG1P7-201ENST00000565246 2704 ntBASIC6.26□□□□□ -1.41
MBD4O95243 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.26□□□□□ -1.41
MBD4O95243 MIR421-201ENST00000365696 85 ntBASIC6.26□□□□□ -1.41
MBD4O95243 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 RNU6-883P-201ENST00000384597 107 ntBASIC6.26□□□□□ -1.41
MBD4O95243 MIR589-201ENST00000385238 99 ntBASIC6.26□□□□□ -1.41
MBD4O95243 NUDT19P3-201ENST00000404698 555 ntBASIC6.26□□□□□ -1.41
MBD4O95243 RN7SKP213-201ENST00000410746 298 ntBASIC6.26□□□□□ -1.41
MBD4O95243 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 AC211486.3-201ENST00000412694 621 ntBASIC6.26□□□□□ -1.41
MBD4O95243 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
MBD4O95243 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.26□□□□□ -1.41
MBD4O95243 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.26□□□□□ -1.41
MBD4O95243 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.26□□□□□ -1.41
MBD4O95243 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 AC092647.2-201ENST00000452998 253 ntBASIC6.26□□□□□ -1.41
MBD4O95243 AC108751.3-201ENST00000461814 1020 ntBASIC6.26□□□□□ -1.41
MBD4O95243 AC090114.3-201ENST00000479267 829 ntBASIC6.26□□□□□ -1.41
MBD4O95243 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 AC006427.1-201ENST00000514359 712 ntBASIC6.26□□□□□ -1.41
MBD4O95243 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.26□□□□□ -1.41
MBD4O95243 HMGN2P6-201ENST00000551091 273 ntBASIC6.26□□□□□ -1.41
MBD4O95243 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.26□□□□□ -1.41
MBD4O95243 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.26□□□□□ -1.41
MBD4O95243 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
MBD4O95243 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
MBD4O95243 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
MBD4O95243 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
MBD4O95243 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
MBD4O95243 SNORA27.3-201ENST00000364937 134 ntBASIC6.25□□□□□ -1.41
MBD4O95243 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
MBD4O95243 MIR1182-201ENST00000408363 97 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 AC007394.1-201ENST00000421941 531 ntBASIC6.25□□□□□ -1.41
MBD4O95243 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.25□□□□□ -1.41
MBD4O95243 AC007563.3-201ENST00000433233 371 ntBASIC6.25□□□□□ -1.41
MBD4O95243 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 AC090018.1-201ENST00000434369 367 ntBASIC6.25□□□□□ -1.41
MBD4O95243 RPS29P10-201ENST00000439197 166 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.25□□□□□ -1.41
MBD4O95243 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.25□□□□□ -1.41
MBD4O95243 AC090804.1-201ENST00000448870 490 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.25□□□□□ -1.41
MBD4O95243 AP002345.1-201ENST00000456493 928 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AC093270.2-201ENST00000486157 792 ntBASIC6.25□□□□□ -1.41
MBD4O95243 RN7SL814P-201ENST00000487715 300 ntBASIC6.25□□□□□ -1.41
MBD4O95243 RPL32P9-201ENST00000487963 407 ntBASIC6.25□□□□□ -1.41
MBD4O95243 RPS12P31-201ENST00000491419 398 ntBASIC6.25□□□□□ -1.41
MBD4O95243 HMGB1P47-201ENST00000511281 589 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 AP002373.2-201ENST00000541631 1060 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.25□□□□□ -1.41
MBD4O95243 RN7SL708P-201ENST00000580952 299 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AC019131.2-201ENST00000609071 870 ntBASIC6.25□□□□□ -1.41
MBD4O95243 MIR7155-201ENST00000615925 56 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AC099494.2-201ENST00000623371 978 ntBASIC6.25□□□□□ -1.41
MBD4O95243 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.25□□□□□ -1.41
MBD4O95243 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.25□□□□□ -1.41
MBD4O95243 AC068870.3-201ENST00000625077 2536 ntBASIC6.25□□□□□ -1.41
MBD4O95243 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
MBD4O95243 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms