Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.28□□□□□ -1.72
UPK1BO75841 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
UPK1BO75841 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
UPK1BO75841 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.28□□□□□ -1.73
UPK1BO75841 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
UPK1BO75841 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.28□□□□□ -1.73
UPK1BO75841 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
UPK1BO75841 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC092747.4-201ENST00000620519 1861 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 RN7SKP113-201ENST00000363891 295 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 SNORD74.4-201ENST00000364129 80 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 MIR105-1-201ENST00000385222 81 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 OR4K12P-201ENST00000406538 961 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AL139135.1-201ENST00000412675 209 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 SKP1P3-201ENST00000429280 487 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 RPL5P7-201ENST00000444235 813 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1BO75841 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 HMGB1P4-201ENST00000455362 567 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 RBMY2HP-201ENST00000457961 720 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC007998.1-201ENST00000474156 672 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC093270.2-201ENST00000486157 792 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.27□□□□□ -1.73
UPK1BO75841 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC018442.3-201ENST00000523025 183 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.27□□□□□ -1.73
UPK1BO75841 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.27□□□□□ -1.73
UPK1BO75841 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC209154.1-201ENST00000582156 337 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 AL353807.4-201ENST00000604995 257 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AC087783.2-201ENST00000605070 562 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 AC005377.1-201ENST00000605126 456 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 RMST_9.1-201ENST00000619945 193 ntBASIC4.27□□□□□ -1.73
UPK1BO75841 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPK1BO75841 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
UPK1BO75841 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
UPK1BO75841 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
UPK1BO75841 RN7SKP240-201ENST00000410583 375 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 RNA5SP39-201ENST00000411245 120 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC106901.1-201ENST00000425086 698 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 MTCO1P51-201ENST00000427672 1060 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC105399.1-202ENST00000447303 205 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPK1BO75841 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 SCARNA10-201ENST00000459255 330 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 RN7SL254P-201ENST00000460609 284 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 RN7SL443P-201ENST00000464331 290 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC018639.1-201ENST00000492994 442 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AC008694.2-201ENST00000517591 306 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC026688.1-201ENST00000520639 1168 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
UPK1BO75841 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 DUX4L52-201ENST00000549363 777 ntBASIC4.26□□□□□ -1.73
UPK1BO75841 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.26□□□□□ -1.73
UPK1BO75841 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.26□□□□□ -1.73
UPK1BO75841 AC008759.1-201ENST00000589783 983 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms