Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 YWHABP2-201ENST00000540201 713 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 RPA2P1-201ENST00000556557 721 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
SOX1O00570 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC6.97□□□□□ -1.29
SOX1O00570 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 AC068020.1-201ENST00000594215 661 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC130352.1-201ENST00000602979 661 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AL390816.3-201ENST00000604527 1066 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AC073046.2-201ENST00000604756 527 ntBASIC6.97□□□□□ -1.29
SOX1O00570 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.97□□□□□ -1.29
SOX1O00570 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 AC091304.9-201ENST00000612091 226 ntBASIC6.97□□□□□ -1.29
SOX1O00570 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 AC122713.2-201ENST00000624942 3335 ntBASIC6.97□□□□□ -1.29
SOX1O00570 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.97□□□□□ -1.29
SOX1O00570 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SOX1O00570 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.97□□□□□ -1.29
SOX1O00570 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.97□□□□□ -1.29
SOX1O00570 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
SOX1O00570 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.96□□□□□ -1.29
SOX1O00570 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.96□□□□□ -1.29
SOX1O00570 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
SOX1O00570 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
SOX1O00570 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
SOX1O00570 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
SOX1O00570 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
SOX1O00570 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SOX1O00570 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 RPL17P50-201ENST00000396131 546 ntBASIC6.96□□□□□ -1.3
SOX1O00570 ATP5HP3-201ENST00000396994 486 ntBASIC6.96□□□□□ -1.3
SOX1O00570 RPL5P20-201ENST00000403848 896 ntBASIC6.96□□□□□ -1.3
SOX1O00570 NCSTNP1-201ENST00000406229 144 ntBASIC6.96□□□□□ -1.3
SOX1O00570 RN7SKP271-201ENST00000410528 320 ntBASIC6.96□□□□□ -1.3
SOX1O00570 RPS26P38-201ENST00000414476 348 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 UBTFL3-201ENST00000418934 1024 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 SRSF1P1-201ENST00000424058 520 ntBASIC6.96□□□□□ -1.3
SOX1O00570 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SOX1O00570 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AC000111.3-201ENST00000433478 193 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AC092001.1-201ENST00000453012 261 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 OR9M1P-201ENST00000459641 921 ntBASIC6.96□□□□□ -1.3
SOX1O00570 RPL5P24-201ENST00000463742 885 ntBASIC6.96□□□□□ -1.3
SOX1O00570 UBA52P7-201ENST00000486088 380 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC008953.1-201ENST00000497334 318 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 RN7SKP298-201ENST00000515950 94 ntBASIC6.96□□□□□ -1.3
SOX1O00570 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 OR5BC1P-201ENST00000529327 739 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC104383.1-201ENST00000530297 370 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC005832.3-201ENST00000537929 631 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC092747.2-201ENST00000545069 983 ntBASIC6.96□□□□□ -1.3
SOX1O00570 GLYCAM1-201ENST00000546596 285 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX1O00570 AC015871.2-201ENST00000603605 948 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC005034.5-201ENST00000604219 466 ntBASIC6.96□□□□□ -1.3
SOX1O00570 AC126177.8-201ENST00000618339 1015 ntBASIC6.96□□□□□ -1.3
SOX1O00570 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 MTND5P17-201ENST00000418405 1603 ntBASIC6.96□□□□□ -1.3
SOX1O00570 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 AC023818.2-201ENST00000623817 2304 ntBASIC6.96□□□□□ -1.3
SOX1O00570 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX1O00570 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
SOX1O00570 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX1O00570 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
SOX1O00570 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms