Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRRM4A7MD48 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SRRM4A7MD48 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
SRRM4A7MD48 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRRM4A7MD48 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRRM4A7MD48 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SRRM4A7MD48 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
SRRM4A7MD48 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SRRM4A7MD48 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL078621.3-201ENST00000623707 2042 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 MAPK10-328ENST00000641553 4009 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 U3.7-201ENST00000363668 216 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 RN7SKP292-201ENST00000365522 317 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 RN7SKP222-201ENST00000410651 315 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 RPS3P2-201ENST00000421346 701 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 DPY19L1P2-201ENST00000426647 915 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL035458.1-201ENST00000433096 585 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 FMO7P-201ENST00000436045 768 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 HMGB1P5-202ENST00000451497 985 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 RN7SL72P-201ENST00000460697 269 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 RPL7AP10-201ENST00000481016 791 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC025459.1-201ENST00000504072 156 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC109481.1-201ENST00000509173 282 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC109464.1-201ENST00000511091 819 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 HMGN1P9-201ENST00000515212 298 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 SNORD46.2-201ENST00000516021 102 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 RN7SKP70-201ENST00000516655 271 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC092709.1-201ENST00000521355 1045 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL359219.2-201ENST00000555184 348 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC012616.1-201ENST00000600294 197 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC079610.2-201ENST00000604818 690 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AP003497.2-201ENST00000624220 967 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AP002371.2-201ENST00000624450 503 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 AL031595.2-201ENST00000624215 19071 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.38□□□□□ -1.71
SRRM4A7MD48 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 TRIM51GP-201ENST00000534741 1350 ntBASIC4.38□□□□□ -1.71
SRRM4A7MD48 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SRRM4A7MD48 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 LINC01963-201ENST00000562038 3148 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 MTND5P11-201ENST00000511037 1812 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 DDX18P4-201ENST00000511690 1966 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 RNA5SP46-201ENST00000362370 120 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 RN7SKP28-201ENST00000364770 305 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SRRM4A7MD48 OR6E1P-201ENST00000414424 923 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 AL596448.1-201ENST00000415024 392 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 BMS1P17-202ENST00000416720 316 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.37□□□□□ -1.71
SRRM4A7MD48 RPL34P3-201ENST00000421454 338 ntBASIC4.37□□□□□ -1.71
SRRM4A7MD48 IPPKP1-201ENST00000422501 768 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms