Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 AC087516.1-201ENST00000561236 2428 ntBASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.58□□□□□ -1.52
TBC1D3FA6NER0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 HSPD1P14-201ENST00000432666 1618 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 MIR223-201ENST00000385204 110 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 HMGB1P10-201ENST00000395823 563 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 HMGB3P19-201ENST00000403971 560 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SPTLC1P2-201ENST00000407089 121 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RNU4-74P-201ENST00000411280 161 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 MTCO1P43-201ENST00000431831 488 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OR6D1P-201ENST00000436165 939 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RPS27P5-201ENST00000444247 244 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 CALM1P2-201ENST00000452941 448 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RSU1P1-201ENST00000453416 441 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RPL21P18-201ENST00000469899 480 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SNRPCP3-201ENST00000474888 476 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC024558.1-201ENST00000505008 528 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC069306.1-201ENST00000507006 843 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC008126.1-201ENST00000549019 480 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AL049779.2-201ENST00000553847 315 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC106734.1-201ENST00000568646 663 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC025574.2-201ENST00000615621 514 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC016769.4-201ENST00000616893 535 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 PABPC1P6-201ENST00000445594 1829 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 SPATA2P1-201ENST00000431223 2055 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.57□□□□□ -1.52
TBC1D3FA6NER0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 MT-RNR2-201ENST00000387347 1559 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 RPL11P3-201ENST00000395256 523 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL355615.1-201ENST00000406187 641 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL590806.1-201ENST00000415818 853 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 TCEA1P2-201ENST00000420496 906 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL133325.1-201ENST00000421090 382 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 PRUNEP1-201ENST00000425846 705 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 Z80107.1-201ENST00000436830 412 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AC044797.1-201ENST00000445744 679 ntBASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.56□□□□□ -1.52
TBC1D3FA6NER0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms