Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 RNU6-252P-201ENST00000363232 107 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 U3.7-201ENST00000363668 216 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC007618.1-201ENST00000366455 732 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 RPL26P37-201ENST00000411983 438 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 COX5BP7-201ENST00000414780 274 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 OR13Z1P-201ENST00000416141 834 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 RPS26P13-201ENST00000419030 330 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC124944.2-201ENST00000429866 1242 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 GSTM5P1-201ENST00000434751 660 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 Z80107.1-201ENST00000436830 412 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC004854.1-201ENST00000440356 349 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 RPL7P55-201ENST00000450522 746 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 NDUFA5P5-201ENST00000468361 342 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CYCSP20-201ENST00000473154 315 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 SYT14P1-201ENST00000481459 721 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 SNORD46.2-201ENST00000516021 102 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 NRBF2P4-201ENST00000520874 850 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL049872.1-201ENST00000556323 322 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 NMNAT1P5-201ENST00000559657 841 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC040958.1-201ENST00000561102 201 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC104229.1-201ENST00000561364 255 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC073137.1-201ENST00000605636 634 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC092159.4-201ENST00000624944 550 ntBASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TCRBV7S3A2A0A539 AC245100.2-201ENST00000454544 1679 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SKP81-201ENST00000365603 331 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RNU6-354P-201ENST00000383862 107 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RNU6-610P-201ENST00000384264 107 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RNU6-31P-201ENST00000384388 108 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 SNORA48.4-201ENST00000391089 134 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AL133388.1-201ENST00000404509 287 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RPL34P3-201ENST00000421454 338 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 IPPKP1-201ENST00000422501 768 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC114973.1-201ENST00000429057 632 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RPL12P17-201ENST00000432393 498 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC002504.1-201ENST00000438281 691 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AL390119.1-201ENST00000440329 312 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 CBX1P5-201ENST00000475330 559 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RPL7P41-201ENST00000485823 957 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL814P-201ENST00000487715 300 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms