Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 PRPF38AP1-201ENST00000451976 933 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 SOX5P1-201ENST00000524155 1127 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC005962.2-201ENST00000611427 652 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC087821.1-201ENST00000623639 567 ntBASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.43□□□□□ -1.22
SHANK2Q9UPX8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 SMG1P7-201ENST00000565246 2704 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 RNU1-85P-201ENST00000364127 164 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 OR1L6-202ENST00000373684 1044 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 MIR134-201ENST00000385258 73 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AL389915.1-201ENST00000422463 466 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC092709.1-201ENST00000521355 1045 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 OR5M2P-201ENST00000529003 936 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC084824.1-201ENST00000550917 1005 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 MIR4715-201ENST00000584117 79 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 PRPF19P1-201ENST00000584766 898 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 AC019206.1-201ENST00000621938 425 ntBASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SHANK2Q9UPX8 KARSP3-201ENST00000571212 1504 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 SNORA73.1-201ENST00000363107 205 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 OR51B3P-201ENST00000412287 913 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 RPL12P9-201ENST00000412942 488 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 NRBF2P3-201ENST00000432731 865 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 BMS1P19-201ENST00000433925 393 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AC005154.2-201ENST00000438110 379 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 ENPP7P9-201ENST00000514456 627 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AL109766.1-201ENST00000555080 552 ntBASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SHANK2Q9UPX8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 DHX40P1-201ENST00000588725 1412 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 SNORA70F-201ENST00000384142 135 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 RNU4-25P-201ENST00000410569 230 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 ELOCP19-201ENST00000411919 318 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AL645608.4-201ENST00000423619 154 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 FABP7P1-201ENST00000424004 391 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 COX6CP13-201ENST00000428703 226 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 DPPA3P2-201ENST00000553589 478 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 RN7SL802P-201ENST00000577858 299 ntBASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHANK2Q9UPX8 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK2Q9UPX8 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.4□□□□□ -1.23
SHANK2Q9UPX8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
SHANK2Q9UPX8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms