Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 RPS23P1-201ENST00000491662 432 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AC231760.1-201ENST00000498002 260 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 OR4A17P-201ENST00000526032 904 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 MIR3691-201ENST00000578066 90 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AL445222.1-201ENST00000607259 628 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 CYP4F35P-202ENST00000636121 390 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 OR9K1P-202ENST00000641111 3217 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 MAPK10-338ENST00000641647 3362 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
SPASTQ9UBP0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SPASTQ9UBP0 AC079097.1-201ENST00000512187 1399 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 OR55B1P-203ENST00000641518 2602 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 U3.2-201ENST00000362981 210 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 HSPA8P15-201ENST00000401676 786 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 DUTP5-201ENST00000406790 469 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 RPSAP35-201ENST00000413753 818 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC093084.1-201ENST00000424233 687 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 RPL7P40-201ENST00000481703 745 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC109462.1-201ENST00000491087 368 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC109464.1-201ENST00000511091 819 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC138832.1-201ENST00000522871 556 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 RN7SL708P-201ENST00000580952 299 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC009303.3-201ENST00000591103 736 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC087763.1-201ENST00000603391 286 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AL139124.1-201ENST00000609123 421 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AL162574.1-201ENST00000615702 950 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 AC027228.2-201ENST00000567141 2154 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
SPASTQ9UBP0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SPASTQ9UBP0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.29□□□□□ -1.56
SPASTQ9UBP0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.29□□□□□ -1.56
SPASTQ9UBP0 SAMMSON-213ENST00000641336 1521 ntBASIC5.29□□□□□ -1.56
SPASTQ9UBP0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SPASTQ9UBP0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SPASTQ9UBP0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SPASTQ9UBP0 RNU6-386P-201ENST00000362650 107 ntBASIC5.29□□□□□ -1.56
SPASTQ9UBP0 RNA5SP305-201ENST00000362665 119 ntBASIC5.29□□□□□ -1.56
SPASTQ9UBP0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SPASTQ9UBP0 RNU6-891P-201ENST00000384280 111 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms