Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
CNTN3Q9P232 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC005034.3-201ENST00000604845 1747 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC122713.2-201ENST00000624942 3335 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC013404.1-201ENST00000413068 249 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 PTP4A1P1-201ENST00000420539 515 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 LINC00328-2P-201ENST00000436585 219 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 DNAJC19P4-201ENST00000440115 345 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 MTCO3P18-201ENST00000440206 761 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 PAXBP1P1-201ENST00000449315 447 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 RPL23AP35-201ENST00000451906 501 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 VPS26AP1-201ENST00000483197 979 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 RN7SL561P-201ENST00000488553 281 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 RN7SL568P-201ENST00000493069 298 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC008429.2-201ENST00000523057 864 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 OR7K1P-201ENST00000546439 926 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 OR11J2P-201ENST00000555298 907 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC011500.1-201ENST00000601963 469 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AP003117.2-201ENST00000606010 545 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC007014.2-201ENST00000615581 479 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC126175.1-201ENST00000617041 758 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 AC072046.2-201ENST00000618366 268 ntBASIC7.15□□□□□ -1.26
CNTN3Q9P232 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.15□□□□□ -1.26
CNTN3Q9P232 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CNTN3Q9P232 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 CASC19-243ENST00000641588 1546 ntBASIC7.15□□□□□ -1.27
CNTN3Q9P232 AC016251.2-201ENST00000623393 3089 ntBASIC7.15□□□□□ -1.27
CNTN3Q9P232 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 AC007406.5-201ENST00000570140 3170 ntBASIC7.15□□□□□ -1.27
CNTN3Q9P232 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.15□□□□□ -1.27
CNTN3Q9P232 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
CNTN3Q9P232 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
CNTN3Q9P232 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.15□□□□□ -1.27
CNTN3Q9P232 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
CNTN3Q9P232 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.15□□□□□ -1.27
CNTN3Q9P232 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
CNTN3Q9P232 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 SNORD65.1-201ENST00000390889 71 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 UBTFL3-201ENST00000418934 1024 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 GLRXP1-201ENST00000423261 334 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 PRUNEP1-201ENST00000425846 705 ntBASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.14□□□□□ -1.27
CNTN3Q9P232 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms