Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.76□□□□□ -1.65
VAPAQ9P0L0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 CR382285.2-201ENST00000624662 1495 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 SNORA67-201ENST00000384423 137 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 MIR600-201ENST00000385007 98 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AL589994.1-201ENST00000404962 340 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 SNORA77-201ENST00000408716 125 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 RN7SKP247-201ENST00000411094 308 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 RNU2-22P-201ENST00000411266 212 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 NPM1P33-201ENST00000438918 872 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 HMGB1P4-201ENST00000455362 567 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 RN7SL466P-201ENST00000497546 295 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 UGT2A3P7-201ENST00000510485 734 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 EIF4A2P5-201ENST00000529914 499 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC022404.1-201ENST00000555320 273 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC005840.5-201ENST00000619166 599 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AC074140.1-201ENST00000621617 208 ntBASIC4.75□□□□□ -1.65
VAPAQ9P0L0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.75□□□□□ -1.65
VAPAQ9P0L0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 ZNF652P1-201ENST00000442420 1309 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 TMSB4XP4-201ENST00000323496 618 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AL353625.1-202ENST00000366273 571 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC099535.1-201ENST00000408928 371 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 RPS29P9-201ENST00000440360 171 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC073052.1-201ENST00000440417 714 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AL031584.1-201ENST00000447169 754 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC002553.2-201ENST00000453217 340 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 RN7SL799P-201ENST00000475891 298 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 RN7SL741P-201ENST00000482473 289 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 NPM1P29-201ENST00000483112 803 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC111000.5-201ENST00000506559 1178 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC012339.2-201ENST00000523996 453 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC007204.2-201ENST00000615022 616 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AL356752.1-201ENST00000615844 593 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 MIR8069-1-201ENST00000616627 86 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC090527.3-201ENST00000619041 548 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 MIR8069-2-201ENST00000621412 86 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC127024.6-201ENST00000621598 424 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC126323.6-202ENST00000568092 3511 ntBASIC4.74□□□□□ -1.65
VAPAQ9P0L0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VAPAQ9P0L0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms