Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 SCAND3P1-201ENST00000439854 1060 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 RPL7P40-201ENST00000481703 745 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 PCNPP1-201ENST00000552501 511 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 AL022394.1-201ENST00000606979 292 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 TRIM51GP-201ENST00000534741 1350 ntBASIC4.5□□□□□ -1.69
KIAA1549Q9HCM3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 MIR589-201ENST00000385238 99 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RNU6-316P-201ENST00000391027 107 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 NUDT19P3-201ENST00000404698 555 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RPL23AP56-201ENST00000460778 453 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AP000619.2-201ENST00000546014 969 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 MIR4330-201ENST00000579077 105 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 MIR4660-201ENST00000583549 74 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC104687.2-201ENST00000604442 342 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AL162431.4-201ENST00000604674 411 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AL157762.1-201ENST00000619612 415 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC009120.7-201ENST00000623452 780 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC239868.2-201ENST00000564237 4527 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 U3.23-201ENST00000391132 200 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RPL12P9-201ENST00000412942 488 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC007738.1-201ENST00000413892 348 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 OR2AM1P-201ENST00000422137 422 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 RPL7P57-201ENST00000423238 740 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 MYL12BP2-201ENST00000503948 512 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 ENPP7P9-201ENST00000514456 627 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KIAA1549Q9HCM3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC009643.2-201ENST00000603543 1448 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AL078599.1-201ENST00000402075 293 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 RSU1P3-201ENST00000412878 835 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AL137845.2-201ENST00000444292 988 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 IGHV5-78-201ENST00000450948 295 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC108751.3-201ENST00000461814 1020 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC021660.1-201ENST00000465006 554 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC090602.1-201ENST00000469695 252 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC020779.1-201ENST00000478757 796 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 AC007686.1-201ENST00000488511 463 ntBASIC4.48□□□□□ -1.69
KIAA1549Q9HCM3 RPL23AP72-201ENST00000492447 435 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms