Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 GAPDHP25-201ENST00000447061 1001 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 RPL7P45-201ENST00000455851 743 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC058823.1-201ENST00000485315 474 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 COX6B1P2-201ENST00000489624 230 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 CR383656.14-201ENST00000551951 406 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC006349.1-201ENST00000555526 235 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 BNIP3P39-201ENST00000601077 554 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AL391001.1-201ENST00000602747 715 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC011626.1-201ENST00000604710 562 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC079395.2-201ENST00000610982 737 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC084824.5-201ENST00000612009 413 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC005840.5-201ENST00000619166 599 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AC006210.2-201ENST00000367074 1545 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 AL929601.4-201ENST00000613011 1341 ntBASIC5.46□□□□□ -1.54
PCDH9Q9HC56 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.46□□□□□ -1.54
PCDH9Q9HC56 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 RNA5SP335-201ENST00000363817 110 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC002524.1-201ENST00000411687 547 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 HSFY1P1-201ENST00000423928 1178 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 CYCSP12-201ENST00000437729 300 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PPIAP20-201ENST00000449839 135 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 RN7SL423P-201ENST00000486202 304 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC108693.1-201ENST00000496068 432 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 AC006249.1-201ENST00000621223 471 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 SAMMSON-209ENST00000641222 1100 ntBASIC5.45□□□□□ -1.54
PCDH9Q9HC56 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDH9Q9HC56 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RNU4-39P-201ENST00000362455 127 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RNU1-77P-201ENST00000390868 162 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC009804.1-201ENST00000400949 179 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC234781.4-201ENST00000419384 244 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 DSTNP5-201ENST00000427921 523 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 CYCSP6-201ENST00000434498 302 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 GAPDHP58-201ENST00000438477 1006 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 SCAND3P1-201ENST00000439854 1060 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 MTND6P5-201ENST00000448266 512 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 MTND5P8-201ENST00000449817 1083 ntBASIC5.44□□□□□ -1.54
PCDH9Q9HC56 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDH9Q9HC56 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms