Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC104229.1-201ENST00000561364 255 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC022884.3-201ENST00000579571 248 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC009237.13-201ENST00000603193 276 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC026741.1-201ENST00000605892 482 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL162574.1-201ENST00000615702 950 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC016957.2-201ENST00000616998 848 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL359742.1-201ENST00000622497 540 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AL138955.1-201ENST00000622881 1040 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 MRE11P1-201ENST00000464884 2127 ntBASIC5.33□□□□□ -1.56
BRF2Q9HAW0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
BRF2Q9HAW0 AC010329.2-201ENST00000595195 2737 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 MTND4P9-201ENST00000507819 1346 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC008432.1-201ENST00000615912 1320 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 METTL21EP-201ENST00000298105 713 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RNA5SP394-201ENST00000364216 119 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 MIR551A-201ENST00000385042 96 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 MIR620-201ENST00000385232 95 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 HMGB1P20-201ENST00000402555 677 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RMRPP5-201ENST00000411156 267 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 TRGV6-201ENST00000417928 299 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC009506.2-201ENST00000420635 840 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL354692.1-201ENST00000423044 315 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC005297.1-201ENST00000444765 862 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 CASP3P1-201ENST00000446037 609 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RPL32P14-201ENST00000463196 378 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 SOX5P1-201ENST00000524155 1127 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 TRIM51DP-201ENST00000529746 596 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC134669.1-201ENST00000581275 672 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC124283.4-201ENST00000581815 456 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC079315.1-201ENST00000602952 623 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL096712.1-201ENST00000614561 159 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 AL590396.2-201ENST00000636511 1041 ntBASIC5.32□□□□□ -1.56
BRF2Q9HAW0 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
BRF2Q9HAW0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 CCT8P1-201ENST00000413611 1657 ntBASIC5.31□□□□□ -1.56
BRF2Q9HAW0 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 DDX18P4-201ENST00000511690 1966 ntBASIC5.31□□□□□ -1.56
BRF2Q9HAW0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
BRF2Q9HAW0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms