Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNORA38B-201ENST00000363524 131 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RNU6-553P-201ENST00000364047 96 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 HNRNPDP2-201ENST00000406475 478 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RNU2-6P-201ENST00000411404 190 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 LUZP4P1-201ENST00000415420 344 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 CYCSP52-201ENST00000422857 310 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 GAPDHP19-201ENST00000431768 1005 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 PCBP2P1-201ENST00000437262 977 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 ISCA1P2-201ENST00000438679 421 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL606662.1-201ENST00000445763 553 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 VN1R38P-201ENST00000450265 887 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 PNPLA4P1-201ENST00000458328 305 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RPS7P10-201ENST00000464254 603 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC015724.1-201ENST00000478577 156 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RN7SL37P-201ENST00000490461 307 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 OR2A20P-203ENST00000498397 1268 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 MTCYBP44-201ENST00000514835 823 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 DPRXP4-201ENST00000578053 568 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 MIR4732-201ENST00000581873 76 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 BUB1P1-201ENST00000603541 607 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 DUXAP11-201ENST00000603858 526 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC009220.3-201ENST00000604318 586 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AP003973.1-201ENST00000604639 691 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC100767.2-201ENST00000604840 693 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AP004247.3-201ENST00000608682 624 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC122133.1-201ENST00000613964 233 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC116618.1-201ENST00000634617 774 ntBASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
TRIM55Q9BYV6 AC016745.2-201ENST00000608834 3443 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC005539.1-201ENST00000443768 1479 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 SMG1P7-201ENST00000565246 2704 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RNA5SP308-201ENST00000362532 115 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 SNORA64.3-201ENST00000365647 134 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 MIR217-201ENST00000384817 110 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL133260.1-201ENST00000405720 405 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RN7SKP296-201ENST00000411185 341 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL161449.1-201ENST00000414531 1199 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 GTF3AP5-201ENST00000442645 697 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC245291.3-201ENST00000443400 292 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL121578.2-201ENST00000448797 447 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 SYPL1P1-201ENST00000473622 768 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC114728.1-201ENST00000488289 483 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RN7SL568P-201ENST00000493069 298 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 RNA5SP278-201ENST00000517055 102 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 UBE2NP1-201ENST00000545592 458 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC084824.1-201ENST00000550917 1005 ntBASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
TRIM55Q9BYV6 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms